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PXYLP1 2-phosphoxylose phosphatase 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100386252, updated on 3-Apr-2024

Summary

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Gene symbol
PXYLP1
Gene description
2-phosphoxylose phosphatase 1
See related
Ensembl:ENSCJAG00000002072
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
ACPL2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 17 NC_071458.1 (36270754..36332777, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 17 NC_048399.1 (36432006..36494916, complement)

Chromosome 17 - NC_071458.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 38 Neighboring gene uncharacterized LOC108588798 Neighboring gene uncharacterized LOC100895947 Neighboring gene splA/ryanodine receptor domain and SOCS box containing 4 Neighboring gene solute carrier family 25 member 36

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-phosphoxylose phosphatase 1
Names
acid phosphatase-like 2
acid phosphatase-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071458.1 Reference mCalJa1.2.pat.X

    Range
    36270754..36332777 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008983745.4 → XP_008981993.2  2-phosphoxylose phosphatase 1 isoform X2

    UniProtKB/TrEMBL
    F6T9H7, F7ABR8, U3E0V9
    Conserved Domains (1) summary
    cl11399
    Location:87 → 424
    HP; Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction

  2. XM_054246895.1 → XP_054102870.1  2-phosphoxylose phosphatase 1 isoform X1

  3. XM_035277721.2 → XP_035133612.1  2-phosphoxylose phosphatase 1 isoform X2

    UniProtKB/TrEMBL
    F6T9H7, F7ABR8, U3E0V9
    Conserved Domains (1) summary
    cl11399
    Location:87 → 424
    HP; Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction

  4. XM_054246897.1 → XP_054102872.1  2-phosphoxylose phosphatase 1 isoform X1

  5. XM_054246896.1 → XP_054102871.1  2-phosphoxylose phosphatase 1 isoform X1

  6. XM_054246898.1 → XP_054102873.1  2-phosphoxylose phosphatase 1 isoform X3

  7. XM_035277723.2 → XP_035133614.1  2-phosphoxylose phosphatase 1 isoform X4

    UniProtKB/TrEMBL
    F7ABR8, F7E8K8
    Conserved Domains (1) summary
    cl11399
    Location:71 → 408
    HP; Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction
Nucleotide Protein
Heading Accession and Version

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