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ANG angiogenin [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100386085, updated on 8-Mar-2024

Summary

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Gene symbol
ANG
Gene description
angiogenin
See related
Ensembl:ENSCJAG00000037398
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
RAA1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 10 NC_071451.1 (51133859..51148134)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 10 NC_048392.1 (51807121..51821396)

Chromosome 10 - NC_071451.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene transfer RNA proline (anticodon UGG) Neighboring gene ribonuclease A family member 4 Neighboring gene epididymal protein 3A Neighboring gene epididymal protein 3B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of eutherian ribonuclease A genes. Premzl M. Mol Genet Genomics, 2014 Apr. PMID 24337645
  2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in antibacterial humoral response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to Gram-positive bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
angiogenin
Names
angiogenin, ribonuclease, RNase A family, 5
ribonuclease A A1
NP_001257851.1
NP_001257852.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001270922.1 → NP_001257851.1  angiogenin precursor

    See identical proteins and their annotated locations for NP_001257851.1

    Status: PROVISIONAL

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    ACFV01031330, ACFV01031331
    UniProtKB/TrEMBL
    F7GKZ5
    Conserved Domains (1) summary
    smart00092
    Location:29 → 143
    RNAse_Pc; Pancreatic ribonuclease

  2. NM_001270923.1 → NP_001257852.1  angiogenin precursor

    See identical proteins and their annotated locations for NP_001257852.1

    Status: PROVISIONAL

    Description
    Transcript Variant: This variant (2) represents use of an alternate promoter and 5' UTR, compared to variant 1. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    ACFV01031330
    UniProtKB/TrEMBL
    F7GKZ5
    Related
    ENSCJAP00000044113.1, ENSCJAT00000054362.1
    Conserved Domains (1) summary
    smart00092
    Location:29 → 143
    RNAse_Pc; Pancreatic ribonuclease

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071451.1 Reference mCalJa1.2.pat.X

    Range
    51133859..51148134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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