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APOA4 apolipoprotein A4 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100385258, updated on 8-Mar-2024

Summary

Gene symbol
APOA4
Gene description
apolipoprotein A4
See related
Ensembl:ENSCJAG00000012625
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
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Genomic context

Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 11 NC_071452.1 (14242137..14244886, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 11 NC_048393.1 (14197643..14200391, complement)

Chromosome 11 - NC_071452.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein A5 Neighboring gene uncharacterized LOC118145627 Neighboring gene apolipoprotein C3 Neighboring gene apolipoprotein A1

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables phosphatidylcholine-sterol O-acyltransferase activator activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in cholesterol homeostasis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in high-density lipoprotein particle assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in lipoprotein metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in phospholipid efflux IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in positive regulation of lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in reverse cholesterol transport IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in triglyceride homeostasis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in very-low-density lipoprotein particle remodeling IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of chylomicron IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of high-density lipoprotein particle IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071452.1 Reference mCalJa1.2.pat.X

    Range
    14242137..14244886 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002754446.4XP_002754492.2  apolipoprotein A-IV