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Amelx amelogenin X-linked [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100379562, updated on 8-Mar-2024

Summary

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Gene symbol
Amelx
Gene description
amelogenin X-linked
See related
Ensembl:ENSCPOG00000021177
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Also known as
Amel
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947516.1 (12516974..12524057)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176303.1 (2028625..2035539, complement)

NW_026947516.1Genomic Context describing neighboring genes Neighboring gene midline 1 Neighboring gene holocytochrome c-type synthase Neighboring gene Rho GTPase activating protein 6 Neighboring gene uncharacterized LOC134474529 Neighboring gene MSL complex subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Amelogenin, the major protein of tooth enamel: a new phylogenetic marker for ordinal mammal relationships. Delgado S, et al. Mol Phylogenet Evol, 2008 May. PMID 18346915

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of tooth enamel IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in enamel mineralization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amelogenin
Names
amelogenin X chromosome

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001172869.1 → NP_001166340.1  amelogenin precursor

    See identical proteins and their annotated locations for NP_001166340.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ012200
    UniProtKB/Swiss-Prot
    Q9Z0K9
    Related
    ENSCPOP00000016676.2, ENSCPOT00000020303.2
    Conserved Domains (1) summary
    smart00818
    Location:28 → 226
    Amelogenin; Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth

RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947516.1 Reference mCavPor4.1

    Range
    12516974..12524057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9Z0K9.1 GenPept UniProtKB/Swiss-Prot:Q9Z0K9

Gene LinkOut

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