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AKAP3 A-kinase anchoring protein 3 [ Sus scrofa (pig) ]

Gene ID: 100337663, updated on 8-Mar-2024

Summary

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Official Symbol
AKAP3provided by VGNC
Official Full Name
A-kinase anchoring protein 3provided by VGNC
Primary source
VGNC:VGNC:85218
See related
Ensembl:ENSSSCG00000000720
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in spleen (RPKM 1.8), ovary (RPKM 1.8) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (65788744..65816031)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (67995078..68020685)

Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 8 Neighboring gene NADH:ubiquinone oxidoreductase subunit A9 Neighboring gene dual specificity tyrosine phosphorylation regulated kinase 4 Neighboring gene RAD51 associated protein 1 Neighboring gene FERRY endosomal RAB5 effector complex subunit 3 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein kinase A binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm principal piece IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A-kinase anchor protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195324.1 → NP_001182253.1  A-kinase anchor protein 3

    See identical proteins and their annotated locations for NP_001182253.1

    Status: PROVISIONAL

    Source sequence(s)
    GU373701
    UniProtKB/TrEMBL
    A0A286ZQX0, A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4, A0A8D1RRN7, D3K5M3, F1SL06
    Related
    ENSSSCP00000034024.2, ENSSSCT00000064398.3
    Conserved Domains (1) summary
    smart00807
    Location:5 → 854
    AKAP_110; A-kinase anchor protein 110 kDa

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

    Range
    65788744..65816031
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021090980.1 → XP_020946639.1  A-kinase anchor protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A286ZQX0, A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4, A0A8D1RRN7, D3K5M3, F1SL06
    Conserved Domains (1) summary
    smart00807
    Location:5 → 854
    AKAP_110; A-kinase anchor protein 110 kDa

  2. XM_021090981.1 → XP_020946640.1  A-kinase anchor protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A286ZQX0, A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4, A0A8D1RRN7, D3K5M3, F1SL06
    Conserved Domains (1) summary
    smart00807
    Location:5 → 854
    AKAP_110; A-kinase anchor protein 110 kDa

  3. XM_013988433.2 → XP_013843887.1  A-kinase anchor protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4
    Conserved Domains (1) summary
    smart00807
    Location:5 → 863
    AKAP_110; A-kinase anchor protein 110 kDa

  4. XM_005655701.3 → XP_005655758.1  A-kinase anchor protein 3 isoform X4

    See identical proteins and their annotated locations for XP_005655758.1

    UniProtKB/TrEMBL
    A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4
    Conserved Domains (1) summary
    smart00807
    Location:5 → 863
    AKAP_110; A-kinase anchor protein 110 kDa

  5. XM_005655703.3 → XP_005655760.1  A-kinase anchor protein 3 isoform X5

    See identical proteins and their annotated locations for XP_005655760.1

    UniProtKB/TrEMBL
    A0A286ZQX0, A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4, A0A8D1RRN7, D3K5M3, F1SL06
    Conserved Domains (1) summary
    smart00807
    Location:5 → 854
    AKAP_110; A-kinase anchor protein 110 kDa

  6. XM_013988432.2 → XP_013843886.1  A-kinase anchor protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4
    Conserved Domains (1) summary
    smart00807
    Location:5 → 863
    AKAP_110; A-kinase anchor protein 110 kDa

  7. XM_021090984.1 → XP_020946643.1  A-kinase anchor protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A8D1UAH4
    Conserved Domains (1) summary
    smart00807
    Location:23 → 831
    AKAP_110; A-kinase anchor protein 110 kDa

  8. XM_021090977.1 → XP_020946636.1  A-kinase anchor protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4
    Conserved Domains (1) summary
    smart00807
    Location:23 → 881
    AKAP_110; A-kinase anchor protein 110 kDa

  9. XM_021090978.1 → XP_020946637.1  A-kinase anchor protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4
    Conserved Domains (1) summary
    smart00807
    Location:23 → 872
    AKAP_110; A-kinase anchor protein 110 kDa

  10. XM_021090982.1 → XP_020946641.1  A-kinase anchor protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A8D0YL76, A0A8D1L1J6, A0A8D1RQI5
    Conserved Domains (1) summary
    smart00807
    Location:19 → 849
    AKAP_110; A-kinase anchor protein 110 kDa

  11. XM_013988434.2 → XP_013843888.1  A-kinase anchor protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A8D0YL76, A0A8D1L1J6
    Conserved Domains (1) summary
    smart00807
    Location:14 → 840
    AKAP_110; A-kinase anchor protein 110 kDa

  12. XM_005655702.3 → XP_005655759.1  A-kinase anchor protein 3 isoform X4

    See identical proteins and their annotated locations for XP_005655759.1

    UniProtKB/TrEMBL
    A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4
    Conserved Domains (1) summary
    smart00807
    Location:5 → 863
    AKAP_110; A-kinase anchor protein 110 kDa

  13. XM_021090979.1 → XP_020946638.1  A-kinase anchor protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8D0YFK1, A0A8D1C9E9, A0A8D1I4D4
    Conserved Domains (1) summary
    smart00807
    Location:11 → 869
    AKAP_110; A-kinase anchor protein 110 kDa

  14. XM_021090983.1 → XP_020946642.1  A-kinase anchor protein 3 isoform X8

    UniProtKB/TrEMBL
    A0A8D1WN97
    Conserved Domains (1) summary
    smart00807
    Location:7 → 837
    AKAP_110; A-kinase anchor protein 110 kDa

RNA

  1. XR_002343802.1 RNA Sequence

  2. XR_002343801.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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