U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

si:dkey-19a16.12 si:dkey-19a16.12 [ Danio rerio (zebrafish) ]

Gene ID: 100332988, updated on 27-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
si:dkey-19a16.12provided by ZNC
Official Full Name
si:dkey-19a16.12provided by ZNC
Primary source
ZFIN:ZDB-GENE-110408-26
See related
Ensembl:ENSDARG00000095940 AllianceGenome:ZFIN:ZDB-GENE-110408-26
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 22
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (6431892..6446327, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (6402046..6416481, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene si:rp71-1i20.2 Neighboring gene uncharacterized LOC101882933 Neighboring gene zgc:171699 Neighboring gene CD48 antigen-like Neighboring gene zgc:172133 Neighboring gene si:ch211-105n15.1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
V-set and immunoglobulin domain-containing protein 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    6431892..6446327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009296014.2 → XP_009294289.1  V-set and immunoglobulin domain-containing protein 1-like

    Related
    ENSDARP00000123841.1, ENSDART00000149673.2
    Conserved Domains (3) summary
    smart00410
    Location:234 → 329
    IG_like; Immunoglobulin like
    pfam07686
    Location:127 → 210
    V-set; Immunoglobulin V-set domain
    cl11960
    Location:30 → 119
    Ig; Immunoglobulin domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Tools