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atp6v0e1 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100216036, updated on 25-Apr-2024

Summary

Official Symbol
atp6v0e1provided by Xenbase
Official Full Name
ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1provided by Xenbase
Primary source
Xenbase:XB-GENE-988748
See related
Ensembl:ENSXETG00000024781
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
m9.2; atp6h; vma21; vma21p; atp6v0e
Orthologs
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Genomic context

Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (43499361..43511587, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (33977393..33989094, complement)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116409719 Neighboring gene CREB3 regulatory factor Neighboring gene ribosomal protein L26 Neighboring gene janus kinase and microtubule interacting protein 2

Genomic regions, transcripts, and products

General protein information

Preferred Names
V-type proton ATPase subunit e 1
NP_001165157.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001171686.2NP_001165157.1  V-type proton ATPase subunit e 1

    See identical proteins and their annotated locations for NP_001165157.1

    Status: VALIDATED

    Source sequence(s)
    AL641168, BC167897, CX780652
    UniProtKB/TrEMBL
    A0A803KJV7, B4F6J0, F6VF02
    Related
    ENSXETP00000023405.4, ENSXETT00000023405.5
    Conserved Domains (1) summary
    pfam05493
    Location:967
    ATP_synt_H; ATP synthase subunit H

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    43499361..43511587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)