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ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100190256, updated on 8-Mar-2024

Summary

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Gene symbol
ATPAF1
Gene description
ATP synthase mitochondrial F1 complex assembly factor 1
See related
Ensembl:ENSTGUG00000008394
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 8 NC_044220.2 (8392498..8400852)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 8 NC_045007.1 (8442656..8450939)

Chromosome 8 - NC_044220.2Genomic Context describing neighboring genes Neighboring gene cytochrome P450 4B1 Neighboring gene EF-hand calcium binding domain 14 Neighboring gene MOB kinase activator 3C Neighboring gene MAPK interacting serine/threonine kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes. Wada K, et al. Proc Natl Acad Sci U S A, 2006 Oct 10. PMID 17018643, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial proton-transporting ATP synthase complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase mitochondrial F1 complex assembly factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001245272.1 → NP_001232201.1  ATP synthase mitochondrial F1 complex assembly factor 1

    See identical proteins and their annotated locations for NP_001232201.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ214438
    UniProtKB/TrEMBL
    B5FZC4, H0ZDJ2
    Related
    ENSTGUP00000008654.2, ENSTGUT00000008745.2
    Conserved Domains (1) summary
    pfam06644
    Location:60 → 290
    ATP11; ATP11 protein

RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044220.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    8392498..8400852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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