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ARPP21 cAMP regulated phosphoprotein 21 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100173450, updated on 10-Apr-2024

Summary

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Gene symbol
ARPP21
Gene description
cAMP regulated phosphoprotein 21
Locus tag
CR201_G0006468
See related
Ensembl:ENSPPYG00000014027
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as
ARPP-21
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (118776993..118933700, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (106595492..106751974, complement)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene replication factor C subunit 3-like Neighboring gene uncharacterized LOC129058594 Neighboring gene U6 spliceosomal RNA Neighboring gene keratin, type II cytoskeletal 8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp459A1213

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-regulated phosphoprotein 21
Names
cyclic AMP-regulated phosphoprotein, 21 kD

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001132991.3 → NP_001126463.1  cAMP-regulated phosphoprotein 21 isoform 1

    See identical proteins and their annotated locations for NP_001126463.1

    Status: VALIDATED

    Source sequence(s)
    JAQQLQ020000002
    UniProtKB/Swiss-Prot
    Q5R6X9
    UniProtKB/TrEMBL
    A0A2J8WYK7, A0A2J8WYP1
    Related
    ENSPPYP00000035104.1, ENSPPYT00000040679.1
    Conserved Domains (1) summary
    pfam14134
    Location:22 → 60
    DUF4301; Domain of unknown function (DUF4301)

  2. NM_001374350.2 → NP_001361279.1  cAMP-regulated phosphoprotein 21 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAQQLQ020000002
    UniProtKB/TrEMBL
    A0A2J8WYI6, A0A2J8WYN8, H2PB74
    Conserved Domains (3) summary
    cd02642
    Location:163 → 224
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:541 → 790
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam12752
    Location:245 → 300
    SUZ; SUZ domain

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    118776993..118933700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054550349.2 → XP_054406324.1  cAMP-regulated phosphoprotein 21 isoform X1

  2. XM_054550350.2 → XP_054406325.1  cAMP-regulated phosphoprotein 21 isoform X3

  3. XM_063721591.1 → XP_063577661.1  cAMP-regulated phosphoprotein 21 isoform X2

  4. XM_009239233.3 → XP_009237508.1  cAMP-regulated phosphoprotein 21 isoform X4

    See identical proteins and their annotated locations for XP_009237508.1

    UniProtKB/Swiss-Prot
    Q5R6X9
    UniProtKB/TrEMBL
    A0A2J8WYK7, A0A2J8WYP1
    Conserved Domains (1) summary
    pfam14134
    Location:22 → 60
    DUF4301; Domain of unknown function (DUF4301)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5R6X9.1 GenPept UniProtKB/Swiss-Prot:Q5R6X9

Gene LinkOut

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