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fam117ab family with sequence similarity 117 member Ab [ Danio rerio (zebrafish) ]

Gene ID: 100151756, updated on 27-Mar-2024

Summary

Official Symbol
fam117abprovided by ZNC
Official Full Name
family with sequence similarity 117 member Abprovided by ZNC
Primary source
ZFIN:ZDB-GENE-080515-7
See related
Ensembl:ENSDARG00000079252 AllianceGenome:ZFIN:ZDB-GENE-080515-7
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:175133
Summary
Orthologous to human FAM117A (family with sequence similarity 117 member A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (9849476..9876072)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (9811633..9838229)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108191783 Neighboring gene RUN domain containing 3Ab Neighboring gene NDUFA4 mitochondrial complex associated b Neighboring gene nerve growth factor receptor b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC100151756

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127471.1NP_001120943.1  uncharacterized protein LOC100151756

    See identical proteins and their annotated locations for NP_001120943.1

    Status: PREDICTED

    Source sequence(s)
    BC161667
    UniProtKB/TrEMBL
    B1WB93
    Related
    ENSDARP00000098069.1, ENSDART00000110458.3
    Conserved Domains (1) summary
    pfam15388
    Location:48324
    FAM117; Protein Family FAM117

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    9849476..9876072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394832.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    72770..99366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)