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zfand4 zinc finger, AN1-type domain 4 [ Danio rerio (zebrafish) ]

Gene ID: 100148477, updated on 27-Mar-2024

Summary

Official Symbol
zfand4provided by ZNC
Official Full Name
zinc finger, AN1-type domain 4provided by ZNC
Primary source
ZFIN:ZDB-GENE-090312-102
See related
Ensembl:ENSDARG00000076703 AllianceGenome:ZFIN:ZDB-GENE-090312-102
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-194n13.3
Summary
Predicted to enable zinc ion binding activity. Orthologous to human ZFAND4 (zinc finger AN1-type containing 4). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (18019349..18069513, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (17888357..17938441, complement)

Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene voltage-dependent anion channel 2 Neighboring gene membrane-associated ring finger (C3HC4) 8 Neighboring gene WASH complex subunit 2C Neighboring gene arachidonate 5-lipoxygenase a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
AN1-type zinc finger protein 4
Names
anubl1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001202471.1NP_001189400.1  AN1-type zinc finger protein 4

    Status: VALIDATED

    Source sequence(s)
    BX901979, CT025882, CU012047
    UniProtKB/TrEMBL
    A0A8M1P2K3, B8A682
    Related
    ENSDARP00000118902.1, ENSDART00000146772.3
    Conserved Domains (3) summary
    cd01802
    Location:1103
    AN1_N; ubiquitin-like domain of AN1
    smart00154
    Location:613651
    ZnF_AN1; AN1-like Zinc finger
    smart00213
    Location:2899
    UBQ; Ubiquitin homologues

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007124.7 Reference GRCz11 Primary Assembly

    Range
    18019349..18069513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002459799.1 RNA Sequence

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394875.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    2263..33164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)