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mon1a MON1 secretory trafficking family member A [ Danio rerio (zebrafish) ]

Gene ID: 100073333, updated on 27-Mar-2024

Summary

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Official Symbol
mon1aprovided by ZNC
Official Full Name
MON1 secretory trafficking family member Aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-070615-6
See related
Ensembl:ENSDARG00000078585 AllianceGenome:ZFIN:ZDB-GENE-070615-6
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:162873
Summary
Predicted to be involved in protein targeting to vacuole. Predicted to act upstream of or within vesicle-mediated transport. Orthologous to human MON1A (MON1 homolog A, secretory trafficking associated). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (35171347..35185057)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (34909418..34923074)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene inka box actin regulator 1a Neighboring gene TRAF-interacting protein Neighboring gene uncharacterized LOC101884091 Neighboring gene macrophage stimulating 1 receptor b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Semaphorin/neuropilin binding specificities are stable over 400 million years of evolution. He Z, et al. Biochem Biophys Res Commun, 2019 Sep 10. PMID 31349972, Free PMC Article
  2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  5. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
  
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of Mon1-Ccz1 complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
vacuolar fusion protein MON1 homolog A
Names
MON1 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001320431.1 → NP_001307360.1  vacuolar fusion protein MON1 homolog A

    Status: VALIDATED

    Source sequence(s)
    BX293991, EH474242, FP102275
    UniProtKB/TrEMBL
    A0A8M1P7N8, F1QDK1
    Related
    ENSDARP00000102772.3, ENSDART00000110839.4
    Conserved Domains (1) summary
    pfam03164
    Location:129 → 529
    Mon1; Trafficking protein Mon1

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    35171347..35185057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002459641.1 RNA Sequence

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394824.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    1..9479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001098770.1: Suppressed sequence

    Description
    NM_001098770.1: This RefSeq was removed because currently there is insufficient support for the transcript.
Nucleotide Protein Strain
Heading Accession and Version

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