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ATP13A3 ATPase 13A3 [ Equus caballus (horse) ]

Gene ID: 100069072, updated on 8-Mar-2024

Summary

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Official Symbol
ATP13A3provided by VGNC
Official Full Name
ATPase 13A3provided by VGNC
Primary source
VGNC:VGNC:15641
See related
Ensembl:ENSECAG00000006749
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
34
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 19 NC_009162.3 (33742873..33824384, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 19 NC_009162.2 (31210865..31291970, complement)

Chromosome 19 - NC_009162.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102149024 Neighboring gene glycoprotein V platelet Neighboring gene WAS/WASL-interacting protein family member 1-like Neighboring gene uncharacterized LOC111769066

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled monoatomic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type ion transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyamine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in polyamine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable cation-transporting ATPase 13A3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009162.3 Reference EquCab3.0 Primary Assembly

    Range
    33742873..33824384 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014732823.2 → XP_014588309.2  probable cation-transporting ATPase 13A3 isoform X1

    UniProtKB/TrEMBL
    A0A9L0R9F7, F7DFE9
    Conserved Domains (1) summary
    TIGR01657
    Location:14 → 1149
    P-ATPase-V; P-type ATPase of unknown pump specificity (type V)

  2. XM_023623520.1 → XP_023479288.1  probable cation-transporting ATPase 13A3 isoform X2

    UniProtKB/TrEMBL
    A0A9L0SSE6, F7DFE9
    Related
    ENSECAP00000077158.1, ENSECAT00000100113.1
    Conserved Domains (1) summary
    TIGR01657
    Location:14 → 1122
    P-ATPase-V; P-type ATPase of unknown pump specificity (type V)

  3. XM_023623519.1 → XP_023479287.1  probable cation-transporting ATPase 13A3 isoform X1

    UniProtKB/TrEMBL
    A0A9L0R9F7, F7DFE9
    Related
    ENSECAP00000059111.1, ENSECAT00000092394.1
    Conserved Domains (1) summary
    TIGR01657
    Location:14 → 1149
    P-ATPase-V; P-type ATPase of unknown pump specificity (type V)

  4. XM_023623521.1 → XP_023479289.1  probable cation-transporting ATPase 13A3 isoform X3

    UniProtKB/TrEMBL
    F7DFE9
    Related
    ENSECAP00000005138.3, ENSECAT00000007109.3
    Conserved Domains (1) summary
    TIGR01657
    Location:14 → 1149
    P-ATPase-V; P-type ATPase of unknown pump specificity (type V)
Nucleotide Protein
Heading Accession and Version

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