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NR2E3 nuclear receptor subfamily 2 group E member 3 [ Equus caballus (horse) ]

Gene ID: 100063879, updated on 8-Mar-2024

Summary

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Official Symbol
NR2E3provided by VGNC
Official Full Name
nuclear receptor subfamily 2 group E member 3provided by VGNC
Primary source
VGNC:VGNC:20868
See related
Ensembl:ENSECAG00000015192
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (122622653..122629984, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 1 NC_009144.2 (121483293..121489346, complement)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene GRAM domain containing 2A Neighboring gene SUMO peptidase family member, NEDD8 specific Neighboring gene myosin IXA Neighboring gene uncharacterized LOC111775978 Neighboring gene thrombospondin type 1 domain containing 4 Neighboring gene leucine rich repeat containing 49 Neighboring gene THAP domain containing 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
photoreceptor-specific nuclear receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    122622653..122629984 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005603320.2 → XP_005603377.1  photoreceptor-specific nuclear receptor

    UniProtKB/TrEMBL
    F6VM42
    Related
    ENSECAP00000013006.3, ENSECAT00000016125.4
    Conserved Domains (2) summary
    cd06950
    Location:193 → 398
    NR_LBD_Tlx_PNR_like; The ligand binding domain of Tailless-like proteins, orphan nuclear receptors
    cd06970
    Location:31 → 122
    NR_DBD_PNR; DNA-binding domain of the photoreceptor cell-specific nuclear receptor (PNR) is composed of two C4-type zinc fingers
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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