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ASTL astacin like metalloendopeptidase [ Equus caballus (horse) ]

Gene ID: 100062491, updated on 8-Mar-2024

Summary

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Official Symbol
ASTLprovided by VGNC
Official Full Name
astacin like metalloendopeptidaseprovided by VGNC
Primary source
VGNC:VGNC:15596
See related
Ensembl:ENSECAG00000011307
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
9
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (12587650..12600832)
102 previous assembly EquCab2.0 (GCF_000002305.2) 15 NC_009158.2 (12317577..12330758)

Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene StAR related lipid transfer domain containing 7 Neighboring gene dual specificity phosphatase 2 Neighboring gene uncharacterized LOC106781674 Neighboring gene adrenoceptor alpha 2B Neighboring gene fumarylacetoacetate hydrolase domain-containing protein 2A Neighboring gene glycerol-3-phosphate acyltransferase 2, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: astacin-like metalloendopeptidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009158.3 Reference EquCab3.0 Primary Assembly

    Range
    12587650..12600832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001916376.3 → XP_001916411.3  LOW QUALITY PROTEIN: astacin-like metalloendopeptidase

    UniProtKB/TrEMBL
    F7ALI3
    Related
    ENSECAP00000009236.4, ENSECAT00000011774.4
    Conserved Domains (2) summary
    cl00064
    Location:95 → 277
    ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...
    cl26464
    Location:279 → 430
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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