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ATP9A ATPase phospholipid transporting 9A (putative) [ Equus caballus (horse) ]

Gene ID: 100052707, updated on 8-Mar-2024

Summary

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Official Symbol
ATP9Aprovided by VGNC
Official Full Name
ATPase phospholipid transporting 9A (putative)provided by VGNC
Primary source
VGNC:VGNC:56195
See related
Ensembl:ENSECAG00000020949
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
33
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 22 NC_009165.3 (40310088..40437393, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 22 NC_009165.2 (39412068..39530031, complement)

Chromosome 22 - NC_009165.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106782449 Neighboring gene nuclear factor of activated T cells 2 Neighboring gene uncharacterized LOC111770034 Neighboring gene spalt like transcription factor 4 Neighboring gene ZFP64 zinc finger protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable phospholipid-transporting ATPase IIA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009165.3 Reference EquCab3.0 Primary Assembly

    Range
    40310088..40437393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023626759.1 → XP_023482527.1  probable phospholipid-transporting ATPase IIA isoform X3

    UniProtKB/TrEMBL
    A0A3Q2HSE4, A0A3Q2LJB1
    Related
    ENSECAP00000041323.1, ENSECAT00000036001.3
    Conserved Domains (2) summary
    cd07541
    Location:41 → 953
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    cl26237
    Location:451 → 559
    Cation_ATPase; Cation transport ATPase (P-type)

  2. XM_023626758.1 → XP_023482526.1  probable phospholipid-transporting ATPase IIA isoform X2

    UniProtKB/TrEMBL
    A0A3Q2HSE4, A0A3Q2HXR8
    Related
    ENSECAP00000038186.2, ENSECAT00000063772.3
    Conserved Domains (2) summary
    cd07541
    Location:44 → 956
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    cl26237
    Location:454 → 562
    Cation_ATPase; Cation transport ATPase (P-type)

  3. XM_023626757.1 → XP_023482525.1  probable phospholipid-transporting ATPase IIA isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HSE4
    Related
    ENSECAP00000019302.2, ENSECAT00000023315.3
    Conserved Domains (2) summary
    cd07541
    Location:55 → 967
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    cl26237
    Location:465 → 573
    Cation_ATPase; Cation transport ATPase (P-type)

  4. XM_023626760.1 → XP_023482528.1  probable phospholipid-transporting ATPase IIA isoform X4

    UniProtKB/TrEMBL
    A0A3Q2HSE4, A0A9L0S653
    Related
    ENSECAP00000071606.1, ENSECAT00000107763.1
    Conserved Domains (2) summary
    cd07541
    Location:41 → 953
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    cl26237
    Location:451 → 559
    Cation_ATPase; Cation transport ATPase (P-type)

  5. XM_023626761.1 → XP_023482529.1  probable phospholipid-transporting ATPase IIA isoform X5

    UniProtKB/TrEMBL
    A0A3Q2HSE4
    Related
    ENSECAP00000089088.1, ENSECAT00000083514.1
    Conserved Domains (2) summary
    cd07541
    Location:39 → 951
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    cl26237
    Location:449 → 557
    Cation_ATPase; Cation transport ATPase (P-type)

  6. XM_023626762.1 → XP_023482530.1  probable phospholipid-transporting ATPase IIA isoform X6

    UniProtKB/TrEMBL
    A0A3Q2HSE4, A0A9L0SSA1
    Related
    ENSECAP00000076869.1, ENSECAT00000136171.1
    Conserved Domains (2) summary
    cd07541
    Location:37 → 949
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    cl26237
    Location:447 → 555
    Cation_ATPase; Cation transport ATPase (P-type)
Nucleotide Protein
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