ABTB1 ankyrin repeat and BTB domain containing 1 [Equus caballus (horse)] - Gene

Summary

Official Symbol: ABTB1provided by VGNC
Official Full Name: ankyrin repeat and BTB domain containing 1provided by VGNC
Primary source: VGNC:VGNC:14958
See related: Ensembl:ENSECAG00000012607
Gene type: protein coding
RefSeq status: MODEL
Organism: Equus caballus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 16

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
103	current	EquCab3.0 (GCF_002863925.1)	16	NC_009159.3 (1688387..1696006)
102	previous assembly	EquCab2.0 (GCF_000002305.2)	16	NC_009159.2 (250685..258245)

Chromosome 16 - NC_009159.3 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
part_of ubiquitin ligase complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: ankyrin repeat and BTB/POZ domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

NC_009159.3 Reference EquCab3.0 Primary Assembly

Range

1688387..1696006

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_005600332.3 → XP_005600389.1 ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X4

Conserved Domains (3) summary

cd18295
Location:72 → 189

BTB1_POZ_ABTB1_BPOZ1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cd18296
Location:229 → 352

BTB2_POZ_ABTB1_BPOZ1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cd18497
Location:351 → 422

BACK_ABTB1_BPOZ; BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
XM_001487887.6 → XP_001487937.1 ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X1

UniProtKB/TrEMBL

F6RTG1

Conserved Domains (5) summary

sd00045
Location:35 → 66

ANK; ANK repeat [structural motif]

cd18295
Location:97 → 214

BTB1_POZ_ABTB1_BPOZ1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cd18296
Location:254 → 377

BTB2_POZ_ABTB1_BPOZ1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cd18497
Location:376 → 447

BACK_ABTB1_BPOZ; BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

pfam12796
Location:6 → 65

Ank_2; Ankyrin repeats (3 copies)
XM_023619856.1 → XP_023475624.1 ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X2

Conserved Domains (5) summary

sd00045
Location:29 → 62

ANK; ANK repeat [structural motif]

cd18295
Location:93 → 210

BTB1_POZ_ABTB1_BPOZ1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cd18296
Location:250 → 373

BTB2_POZ_ABTB1_BPOZ1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cd18497
Location:372 → 443

BACK_ABTB1_BPOZ; BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cl39094
Location:6 → 61

Ank_2; Ankyrin repeats (3 copies)
XM_005600331.3 → XP_005600388.1 ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X3

UniProtKB/TrEMBL

A0A3Q2KZ06

Related

ENSECAP00000030073.2, ENSECAT00000054410.2

Conserved Domains (3) summary

cd18295
Location:76 → 193

BTB1_POZ_ABTB1_BPOZ1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cd18296
Location:233 → 356

BTB2_POZ_ABTB1_BPOZ1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cd18497
Location:355 → 426

BACK_ABTB1_BPOZ; BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
XM_005600333.3 → XP_005600390.1 ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X5

Conserved Domains (3) summary

cd18296
Location:112 → 235

BTB2_POZ_ABTB1_BPOZ1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cd18497
Location:234 → 305

BACK_ABTB1_BPOZ; BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

cl38908
Location:1 → 72

BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily