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ATP6V1D ATPase H+ transporting V1 subunit D [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100009221, updated on 8-Mar-2024

Summary

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Gene symbol
ATP6V1D
Gene description
ATPase H+ transporting V1 subunit D
See related
Ensembl:ENSOCUG00000012018
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Also known as
VHA36
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 20 NC_067393.1 (4638386..4659207)

Chromosome 20 - NC_067393.1Genomic Context describing neighboring genes Neighboring gene pleckstrin 2 Neighboring gene eukaryotic translation initiation factor 2 subunit alpha Neighboring gene protein associated with LIN7 1, MAGUK p55 family member Neighboring gene U5 spliceosomal RNA Neighboring gene golgi associated RAB2 interactor family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067393.1 Chromosome 20 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Osteoclast molecular phenotyping by random cDNA sequencing. Sakai D, et al. Bone, 1995 Aug. PMID 8554918

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit D
Names
ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
V-ATPase 28 kDa accessory protein
V-ATPase subunit D
vacuolar proton pump subunit D
vacuolar proton-ATPase subunit D
NP_001075837.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082368.1 → NP_001075837.1  V-type proton ATPase subunit D

    See identical proteins and their annotated locations for NP_001075837.1

    Status: PROVISIONAL

    Source sequence(s)
    U45447
    UniProtKB/Swiss-Prot
    O97755
    UniProtKB/TrEMBL
    A0A5F9CIZ4
    Related
    ENSOCUP00000010335.2, ENSOCUT00000012014.2
    Conserved Domains (1) summary
    pfam01813
    Location:17 → 206
    ATP-synt_D; ATP synthase subunit D

RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067393.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    4638386..4659207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O97755.1 GenPept UniProtKB/Swiss-Prot:O97755

Gene LinkOut

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