U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100003530 T-cell surface antigen CD2-like [ Danio rerio (zebrafish) ]

Gene ID: 100003530, updated on 27-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LOC100003530
Gene description
T-cell surface antigen CD2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 22
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (6320260..6331689)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (6291003..6293326)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene ribonuclease like 2 Neighboring gene uncharacterized LOC555502 Neighboring gene uncharacterized LOC108181187 Neighboring gene zgc:113298 Neighboring gene si:rp71-1i20.2 Neighboring gene uncharacterized LOC101882933 Neighboring gene zgc:171699 Neighboring gene CD48 antigen-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

General protein information

Go to the top of the page Help
Preferred Names
T-cell surface antigen CD2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    6320260..6331689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017353224.2 → XP_017208713.2  T-cell surface antigen CD2-like

    UniProtKB/TrEMBL
    A0A8M6Z3F2
    Conserved Domains (1) summary
    cl11960
    Location:24 → 119
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Tools