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Links from GEO DataSets

Items: 12

1.
Full record GDS811

Amyloid precursor protein mutant overexpression in strain resistant to neuronal cell loss

Expression profiling of brain left hippocampi from 12 month old Tg2576 transgenics overexpressing the amyloid precursor protein with the Swedish mutation (APPSw). APPSw linked to the early-onset Alzheimer's disease. Tg2576 express neuroprotective genes that prevent neuronal cell loss.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 2 strain sets
Platform:
GPL81
Series:
GSE1556
4 Samples
Download data
2.

Control vs. APPSw mice gene expressions

(Submitter supplied) Gene expression changes in mice overexpressing amyloid precursor protein with the Swedish mutation (Tg2576; APPSw). The gene expression levels in male 12 month-old APPSw mice (GSM26708, GSM26709) were compared to those in male nontransgenic littermate control mice (GSM26706, GSM26707). Data were analyzed with MAS 5.0 and scaled to 2500.
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS811
Platform:
GPL81
4 Samples
Download data
Series
Accession:
GSE1556
ID:
200001556
3.

Vehicle and sAPPalpha-treated hippocampal slice cultures

(Submitter supplied) Gene expression changes induced by alpha-secretase cleaved amyloid precursor protein (sAPPalpha) in organotypic hippocampal slice cultures of male, postnatal day 15 mice (C57B6/SJL). Hippocampal slice cultures were treated with phosphate buffered saline (GSM26700, GSM26701, GSM26702) or 1 nM sAPPalpha (GSM26703, GSM26704, GSM26705) for 24 h. Each sample consists of total RNA isolated from 8-12 slices from 4 mice. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS809
Platform:
GPL81
6 Samples
Download data
Series
Accession:
GSE1555
ID:
200001555
4.
Full record GDS809

Alpha-secretase cleaved amyloid precursor protein effect on hippocampus

Expression profiling of hippocampal slice cultures treated with 1 nM alpha-secretase cleaved amyloid precursor protein (sAPPalpha) for 24 hours. Hippocampi obtained from 15 day postnatal C57B6/SJL males. Results provide insight into the neuroprotective activity of sAPPalpha.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 2 agent sets
Platform:
GPL81
Series:
GSE1555
6 Samples
Download data
5.

Modulation of the endocytic, bioenergetic and transcriptomic pathways subserve the neuroprotective, anti-amyloidogenic action of cleavage-specific tau 12A12mAb in Alzheimer’s Disease mouse model

(Submitter supplied) Beyond deficits in hippocampal-dependent episodic memory, Alzheimer’s Disease (AD) features sensory impairment in visual cognition consistent with extensive neuropathology in the retina. 12A12 is a monoclonal cleavage specific antibody (mAb) which in vivo selectively neutralizes the AD-relevant, harmful N-terminal 20-22kDa tau fragment(s) (i.e NH2htau) without altering the full-length normal protein. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL25723
31 Samples
Download data: CHP
Series
Accession:
GSE223593
ID:
200223593
6.

Transcriptional Profiling of Neuronal APP/APLP2 Double-Conditional Knockout Mice.

(Submitter supplied) Gene expression analysis of 2-month-old APP/APLP2 double-conditional Knockout (N-dCKO) mice and littermate APLP2 knockout controls, APP knockout and wildtype controls.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL1261
16 Samples
Download data: CEL, CHP
Series
Accession:
GSE48622
ID:
200048622
7.

Neuronal and glial Gene expression from control and healthy patient iPSC-derived cortical neurons

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
unidentified; Homo sapiens
Type:
Expression profiling by array
Platforms:
GPL21292 GPL21293
104 Samples
Download data: RCC
Series
Accession:
GSE76551
ID:
200076551
8.

Neuronal and glial Gene expression from control and healthy patient iPSC-derived cortical neurons (B)

(Submitter supplied) Neuronal or glial cell fates related gene expression from single cells with variety of sAPPa or total Aβ secretion profiles were presented here.
Organism:
Homo sapiens; unidentified
Type:
Expression profiling by array
Platform:
GPL21292
32 Samples
Download data: RCC
Series
Accession:
GSE76547
ID:
200076547
9.

Neuronal and glial Gene expression from control and healthy patient iPSC-derived forebrain neurons (A)

(Submitter supplied) Neuronal or glial cell fates related gene expression from single cells with variety of sAPPa or total Aβ secretion profiles were presented here.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL21293
72 Samples
Download data: RCC
Series
Accession:
GSE76545
ID:
200076545
10.

APP levels mediate beta-amyloid but not tau-related aspects of Alzheimer’s disease in a Down syndrome model of cortical neurogenesis.

(Submitter supplied) Early-onset Alzheimer’s disease-like pathology in Down syndrome (DS, trisomy 21) is commonly attributed to an increased dosage of the amyloid precursor protein (APP) gene. To test this central tenet of the amyloid-cascade hypothesis we deleted the supernumerary copy of the APP gene in trisomic DS iPSC, or upregulated APP expression in euploid human pluripotent stem cell lines with dCas9-VP64, and subjected these lines to prolonged cortical neural differentiation. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10558
34 Samples
Download data: TXT
Series
Accession:
GSE100680
ID:
200100680
11.

A transcriptomic analysis reveals increased complexity of the alternative splicing landscape by Nsmce1 overexpression in mouse hippocampal neuronal cell

(Submitter supplied) Nsmce1 (NSE1 Homolog, SMC5-SMC6 Complex Component) is a Protein Coding gene, it was reported to function not only in positive regulation of response to DNA damage stimulus but also in the neurological diseases and disorders.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21493
4 Samples
Download data: TXT
Series
Accession:
GSE113436
ID:
200113436
12.

Regulatory function of Pja2 mediated by the P2rx3/P2rx7 axis in mouse hippocampal neuronal cells

(Submitter supplied) A member of the growing family of mammalian RING E3-ubiquitin ligases praja2 (Pja2) was reported to function not only in several types of cancer but also in the neurological diseases and disorders. As a result, the expression of App, Mapt and Gsap could be inhibited by Pja2 overexpression and activated by the knockdown of Pja2. RNA sequencing (RNA-seq) was then used to evaluate and quantify the transcriptomes in response to the overexpression of Pja2 in mouse hippocampal neuronal HT-22 cells.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21493
4 Samples
Download data: TXT
Series
Accession:
GSE109699
ID:
200109699
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