GEO DataSets

(Submitter supplied) Lettuce is one of most consumed vegetables globally. This crop is susceptible to abiotic stresses. To understand the molecular mechanisms of stress response in lettuce, global transcriptome analysis was conducted. This analysis revealed distinctive temporal expression patterns among the stress-regulated genes in lettuce plants exposed to abiotic stresses

Organism:

Lactuca sativa

Type:

Expression profiling by high throughput sequencing

Platform:

GPL26895

53 Samples

Download data: CSV

(Submitter supplied) Transcriptome profiling of lettuce plants exposed to low temperature (4°C)

Organism:

Lactuca sativa

Type:

Expression profiling by high throughput sequencing

Platform:

GPL26895

12 Samples

Download data: CSV

(Submitter supplied) To improve the gene annotation and address a series of biological questions, we generated 490,502,822 clean reads of RNA-Seq data from nine tissue types of 'sijimi' longan, including root, stem, leaf, flower_bud, flower, young fruit, pericarp, pulp, and seed, and used them for mapping, and annotation of the longan genome sequence. About 53.55 ~79.40 % of the unique RNA sequences from nine RNA-seq data could be mapped to the genome. more...

Organism:

Dimocarpus longan

Type:

Expression profiling by high throughput sequencing

Platform:

GPL22162

9 Samples

Download data: BEDGRAPH, TXT

(Submitter supplied) The small RNAs and their targets were characterized in lettuce (Lactuca sativa) genome by deep sequencing the small RNA populations of leaf tissues (cv. Salinas, Cobham and Diana), inoculated with Bremia and mock. The small RNA targets were also validated using PARE/degradome data derived from the same tissues.

Organism:

Lactuca sativa

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL22142

20 Samples

Download data: TXT