GSM1383585[Accession] - GEO DataSets

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Items: 4

Select item 2000574831.

Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below. DNA methylation is an important epigenetic regulator of gene expression. Recent studies have revealed widespread associations between genetic variation and methylation levels. However, the mechanistic links between genetic variation and methylation remain unclear. To begin addressing this gap, we collected methylation data at ~300,000 loci in lymphoblastoid cell lines (LCLs) from 64 HapMap Yoruba individuals, and genome-wide bisulfite sequence data in ten of these individuals. more...

Organism:: Homo sapiens

Type:: Methylation profiling by genome tiling array; Methylation profiling by high throughput sequencing

Platforms:: GPL13534 GPL11154
74 Samples

Download data: TXT

Series

Accession:: GSE57483

ID:: 200057483

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000574812.

Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels [Bisulfite-array]

(Submitter supplied) DNA methylation is an important epigenetic regulator of gene expression. Recent studies have revealed widespread associations between genetic variation and methylation levels. However, the mechanistic links between genetic variation and methylation remain unclear. To begin addressing this gap, we collected methylation data at ~300,000 loci in lymphoblastoid cell lines (LCLs) from 64 HapMap Yoruba individuals, and genome-wide bisulfite sequence data in ten of these individuals. more...

Organism:: Homo sapiens

Type:: Methylation profiling by genome tiling array

Platform:: GPL13534
64 Samples

Download data: TXT

Series

Accession:: GSE57481

ID:: 200057481

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000135343.

Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)

(Submitter supplied) 1 difference between HumanMethylation450_15017482_v.1.1.bpm and HumanMethylation450_15017482_v.1.2.bpm: 1.1: 41636384,NEGATIVE,-99,Negative 604 1.2: 41636384,RESTORATION,Green,Restore Protocol: See manufacturer's website