GSM1072290[Accession] - GEO DataSets

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Items: 4

Select item 2000438511.

Functional DNA methylation is accompanied by chromatin accessibility [methylation]

(Submitter supplied) Analysis of nucleosome positioning and chromatin state by using CpG methyltransferase M.SssI to methylate nuclei. Unmethylated regions that gain methylation (low to high beta value) are known to be accessible and nucleosome depleted. Method used to study changes after epigenetic drug treatments identified that majority of demethylation events are not accompanied by chromatin accessibility changes.

Organism:: Homo sapiens

Type:: Methylation profiling by array

Platform:: GPL13534
20 Samples

Download data: TXT

Series

Accession:: GSE43851

ID:: 200043851

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000388582.

AcceSssIble Assay to Study the Chomatin Accessibility and DNA Methylation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Methylation profiling by array; Expression profiling by array

Platforms:: GPL10904 GPL13534
42 Samples

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Series

Accession:: GSE38858

ID:: 200038858

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000135343.

Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)

(Submitter supplied) 1 difference between HumanMethylation450_15017482_v.1.1.bpm and HumanMethylation450_15017482_v.1.2.bpm: 1.1: 41636384,NEGATIVE,-99,Negative 604 1.2: 41636384,RESTORATION,Green,Restore Protocol: See manufacturer's website