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Items: 20

1.

Comparative transcriptome profiling of a rice line carrying Xa39 and its parents triggered by Xanthomonas oryzae pv. oryzae provides novel insights into the broad-spectrum hypersensitive response

(Submitter supplied) To dissect the molecular mechanisms of resistance mediated by Xa39,the transcriptome profiling of a rice line carrying Xa39 and its parents at the early stage of Xoo infection were investigated. A rice introgression line H471 carrying Xa39 exhibited a typical local hypersensitive response phenotype, accompanied by programmed cell death after inoculation with the Xoo Philippines’ race 9b.Our results indicated there might be cross-talk between the Xa39-mediated signal transduction cascades and the GA/BR signaling pathway, and the defense mechanism was related to diverse kinases, transcription factors, post-translational regulation, and R genes.
Organism:
Oryza sativa
Type:
Expression profiling by high throughput sequencing
Platform:
GPL13160
18 Samples
Download data: XLSX
Series
Accession:
GSE62488
ID:
200062488

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Oryza sativa)

Organism:
Oryza sativa
116 Series
1890 Samples
Download data
Platform
Accession:
GPL13160
ID:
100013160

3.

H471-2dpi-2

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527804
ID:
301527804

SRA Run Selector

4.

H471-2dpi-1

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527803
ID:
301527803

SRA Run Selector

5.

P28-2dpi-2

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527802
ID:
301527802

SRA Run Selector

6.

P28-2dpi-1

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527801
ID:
301527801

SRA Run Selector

7.

HHZ-2dpi-2

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527800
ID:
301527800

SRA Run Selector

8.

HHZ-2dpi-1

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527799
ID:
301527799

SRA Run Selector

9.

H471-1dpi-2

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527798
ID:
301527798

SRA Run Selector

10.

H471-1dpi-1

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527797
ID:
301527797

SRA Run Selector

11.

P28-1dpi-2

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527796
ID:
301527796

SRA Run Selector

12.

P28-1dpi-1

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527795
ID:
301527795

SRA Run Selector

13.

HHZ-1dpi-2

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527794
ID:
301527794

SRA Run Selector

14.

HHZ-1dpi-1

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527793
ID:
301527793

SRA Run Selector

15.

H471-ck-2

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527792
ID:
301527792

SRA Run Selector

16.

H471-ck-1

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527791
ID:
301527791

SRA Run Selector

17.

P28-ck-2

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527790
ID:
301527790

SRA Run Selector

18.

P28-ck-1

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527789
ID:
301527789

SRA Run Selector

19.

HHZ-ck-2

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527788
ID:
301527788

SRA Run Selector

20.

HHZ-ck-1

Organism:
Oryza sativa
Source name:
leaves
Platform:
GPL13160
Series:
GSE62488
Download data
Sample
Accession:
GSM1527787
ID:
301527787

SRA Run Selector

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