GSE49226[Accession] - GEO DataSets - NCBI

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Select item 2000492261.

The small RNA diversity from Medicago truncatula roots under biotic interactions evidences the environmental plasticity of the miRNAome

(Submitter supplied) Plants show a remarkable plasticity to adapt their root architecture to biotic and abiotic constraints of the soil environment. Although some of these modifications are fine-tuned by miRNAs, there are still shadow zones in these regulations. In the model legume Medicago truncatula, we analyzed the small RNA (smRNA) transcriptome of roots submitted to symbiotic and pathogenic interactions. Mapping on the genome and prediction of pre-miRNA hairpins allowed the identification of 416 candidates. more...

Organism:: Medicago truncatula

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL17491
23 Samples

Download data: FA

Series

Accession:: GSE49226

ID:: 200049226

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000174912.

Illumina HiSeq 2000 (Medicago truncatula)

Organism:: Medicago truncatula

12 Series
410 Samples

Platform

Accession:: GPL17491

ID:: 100017491

Select item 3011956353.

Organism:: Medicago truncatula

Source name:: Root, Factor Myc/Nod control roots

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195635

ID:: 301195635

SRA Run Selector

Select item 3011956344.

Organism:: Medicago truncatula

Source name:: Root, Factor Myc/Nod control roots

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195634

ID:: 301195634

SRA Run Selector

Select item 3011956335.

Organism:: Medicago truncatula

Source name:: Root, Factor Myc/Nod control roots

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195633

ID:: 301195633

SRA Run Selector

Select item 3011956326.

Organism:: Medicago truncatula

Source name:: Root, treated with NOD factor

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195632

ID:: 301195632

SRA Run Selector

Select item 3011956317.

Organism:: Medicago truncatula

Source name:: Root, treated with NOD factor

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195631

ID:: 301195631

SRA Run Selector

Select item 3011956308.

Organism:: Medicago truncatula

Source name:: Root, treated with NOD factor

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195630

ID:: 301195630

SRA Run Selector

Select item 3011956299.

Organism:: Medicago truncatula

Source name:: Root, treated with Myc-LCO factor

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195629

ID:: 301195629

SRA Run Selector

Select item 30119562810.

Organism:: Medicago truncatula

Source name:: Root, treated with Myc-LCO factor

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195628

ID:: 301195628

SRA Run Selector

Select item 30119562711.

Organism:: Medicago truncatula

Source name:: Root, treated with Myc-LCO factor

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195627

ID:: 301195627

SRA Run Selector

Select item 30119562612.

Organism:: Medicago truncatula

Source name:: Root, treated by Salt

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195626

ID:: 301195626

SRA Run Selector

Select item 30119562513.

Organism:: Medicago truncatula

Source name:: Root, untreated

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195625

ID:: 301195625

SRA Run Selector

Select item 30119562414.

Organism:: Medicago truncatula

Source name:: Leaves, untreated

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195624

ID:: 301195624

SRA Run Selector

Select item 30119562315.

Organism:: Medicago truncatula

Source name:: Root, treated by Salt

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195623

ID:: 301195623

SRA Run Selector

Select item 30119562216.

Organism:: Medicago truncatula

Source name:: Root, untreated

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195622

ID:: 301195622

SRA Run Selector

Select item 30119562117.

Organism:: Medicago truncatula

Source name:: Root, Verticillium albo-atrum-infected

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195621

ID:: 301195621

SRA Run Selector

Select item 30119562018.

Organism:: Medicago truncatula

Source name:: Root, untreated

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195620

ID:: 301195620

SRA Run Selector

Select item 30119561919.

Organism:: Medicago truncatula

Source name:: Root, Ralstonia solanacearum GMI1000-infected

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195619

ID:: 301195619

SRA Run Selector

Select item 30119561820.

Organism:: Medicago truncatula

Source name:: Root, untreated

Platform:: GPL17491
Series:: GSE49226

Sample

Accession:: GSM1195618

ID:: 301195618

SRA Run Selector

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