A general framework for optimization of probes for gene expression microarray and its application to the fungus Podospora anserina - - GEO DataSets

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A general framework for optimization of probes for gene expression microarray and its application to the fungus Podospora anserina

(Submitter supplied) A genome wide microarray, covering the 10546 presently known and predicted CDS, has been constructed with the Agilent in-situ synthesized 60-mers technology. 1) A library of 10 oligonucleotides per CDS has been design by the manufacturer. 2) A computational step has been performed to determine 3' position, intron position and cross-hybridization rate of all probes. These data have been compiled to attribute a score to each probe and thus, to select a first set of 4 oligonucleotides per CDS. more...

Organism:: Podospora anserina

Type:: Expression profiling by array; Genome variation profiling by array

Platforms:: GPL10116 GPL10115
27 Samples

Download data: TXT

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Accession:: GSE20734

ID:: 200020734

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