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dbVar

Database of genomic structural variation

nsv5906122

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:55

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 125 SVs from 23 studies. See in: genome view

Submitted genomic138,264,758-138,264,812

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5906122	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	138,264,758	138,264,812
nsv5906122	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	137,983,600	137,983,654

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17400772	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17400772	Submitted genomic		NC_000003.12:g.138 264758_138264812de l	GRCh38 (hg38)		NC_000003.12	Chr3	138,264,758	138,264,812
nssv17400772	Remapped	Perfect	NC_000003.11:g.137 983600_137983654de l	GRCh37.p13	First Pass	NC_000003.11	Chr3	137,983,600	137,983,654

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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