Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5889559

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:310

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 193 SVs from 49 studies. See in: genome view

Submitted genomic128,113,685-128,113,994

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5889559	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	128,113,685	128,113,994
nsv5889559	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	128,871,259	128,871,568

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17409118	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17409118	Submitted genomic		NC_000002.12:g.128 113685_128113994de l	GRCh38 (hg38)		NC_000002.12	Chr2	128,113,685	128,113,994
nssv17409118	Remapped	Perfect	NC_000002.11:g.128 871259_128871568de l	GRCh37.p13	First Pass	NC_000002.11	Chr2	128,871,259	128,871,568

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI