nsv5727200
- Organism: Homo sapiens
- Study:nstd211 (Chuang et al. 2021)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:Insertion of a SVA mobile element relative to the reference
- Publication(s):Chuang et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 120 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 120 SVs from 37 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5727200 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000012.12 | Chr12 | 111,587,336 | 111,587,336 | ||
nsv5727200 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000012.11 | Chr12 | 112,025,140 | 112,025,140 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv17238290 | sva insertion | Sequencing | Other |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17238290 | Submitted genomic | NC_000012.12:g.111 587336_111587337in s295 | GRCh38 (hg38) | NC_000012.12 | Chr12 | 111,587,336 | 111,587,336 | ||
nssv17238290 | Remapped | Perfect | NC_000012.11:g.112 025140_112025141in s295 | GRCh37.p13 | First Pass | NC_000012.11 | Chr12 | 112,025,140 | 112,025,140 |