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dbVar

Database of genomic structural variation

nsv5560580

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:sequence alteration
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:79,808,955

Description:complex variant
Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 189300 SVs from 142 studies. See in: genome view

Submitted genomic151,447,581-231,256,535

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5560580	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	151,447,581	231,256,535
nsv5560580	Remapped	Good	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	152,304,095	232,121,248

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16925488	sequence alteration	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16925488	Submitted genomic		GRCh38 (hg38)		NC_000002.12	Chr2	151,447,581	231,256,535
nssv16925488	Remapped	Good	GRCh37.p13	First Pass	NC_000002.11	Chr2	152,304,095	232,121,248

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16925488	<0.001	1	6404

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