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dbVar

Database of genomic structural variation

nsv5557997

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 117 SVs from 28 studies. See in: genome view

Submitted genomic36,431,651-36,431,702

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5557997	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	36,431,651	36,431,702
nsv5557997	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	36,897,252	36,897,303

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16901447	sva insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16901447	Submitted genomic		NC_000001.11:g.364 31651_36431702ins7 65	GRCh38 (hg38)		NC_000001.11	Chr1	36,431,651	36,431,702
nssv16901447	Remapped	Perfect	NC_000001.10:g.368 97252_36897303ins7 65	GRCh37.p13	First Pass	NC_000001.10	Chr1	36,897,252	36,897,303

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16901447	0.014	90	6398

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