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dbVar

Database of genomic structural variation

nsv5412802

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 81 SVs from 20 studies. See in: genome view

Submitted genomic60,928,013-60,928,064

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5412802	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000010.11	Chr10	60,928,013	60,928,064
nsv5412802	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	62,687,771	62,687,822

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17033892	alu insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17033892	Submitted genomic		NC_000010.11:g.609 28013_60928064ins2 81	GRCh38 (hg38)		NC_000010.11	Chr10	60,928,013	60,928,064
nssv17033892	Remapped	Perfect	NC_000010.10:g.626 87771_62687822ins2 81	GRCh37.p13	First Pass	NC_000010.10	Chr10	62,687,771	62,687,822

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17033892	0.005	33	6404

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