nsv5017096
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,089
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 216 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 216 SVs from 39 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5017096 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000017.11 | Chr17 | 82,253,755 (-2, +68) | 82,254,843 (-47, +3) | ||
nsv5017096 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000017.10 | Chr17 | 80,211,631 (-2, +68) | 80,212,719 (-47, +3) |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv16567361 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16567361 | Submitted genomic | NC_000017.11:g.(82 253753_82253823)_( 82254796_82254846) del | GRCh38 (hg38) | NC_000017.11 | Chr17 | 82,253,755 (-2, +68) | 82,254,843 (-47, +3) | ||
nssv16567361 | Remapped | Perfect | NC_000017.10:g.(80 211629_80211699)_( 80212672_80212722) del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 80,211,631 (-2, +68) | 80,212,719 (-47, +3) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv16567361 | <0.001 | 1 | 29246 |