nsv4766373
- Organism: Homo sapiens
- Study:nstd199 (Quan et al. 2021)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Quan et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 167 SVs from 45 studies. See in: genome view
Overlapping variant regions from other studies: 34 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 21 SVs from 13 studies. See in: genome view
Overlapping variant regions from other studies: 174 SVs from 46 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4766373 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 1,009,554 | 1,009,554 |
| nsv4766373 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_3 | Second Pass | NT_187681.1 | Chr11|NT_1 87681.1 | 79,145 | 79,145 |
| nsv4766373 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_2 | Second Pass | NT_187656.1 | Chr11|NT_1 87656.1 | 72,297 | 72,297 |
| nsv4766373 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 1,009,554 | 1,009,554 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16284347 | insertion | Sequencing | Split read mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16284347 | Remapped | Perfect | NT_187681.1:g.7914 5_79146ins128 | GRCh38.p12 | Second Pass | NT_187681.1 | Chr11|NT_1 87681.1 | 79,145 | 79,145 |
| nssv16284347 | Remapped | Perfect | NT_187656.1:g.7229 7_72298ins128 | GRCh38.p12 | Second Pass | NT_187656.1 | Chr11|NT_1 87656.1 | 72,297 | 72,297 |
| nssv16284347 | Remapped | Perfect | NC_000011.10:g.100 9554_1009555ins128 | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 1,009,554 | 1,009,554 |
| nssv16284347 | Submitted genomic | NC_000011.9:g.1009 554_1009555ins128 | GRCh37 (hg19) | NC_000011.9 | Chr11 | 1,009,554 | 1,009,554 |