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dbVar

Database of genomic structural variation

nsv4747977

Organism: Homo sapiens

Study:nstd199 (Quan et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:302

Publication(s):Quan et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 117 SVs from 25 studies. See in: genome view

Remapped(Score: Perfect):34,252,362-34,252,663

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4747977	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	34,252,362	34,252,663
nsv4747977	Remapped	Perfect	GRCh38.p12	ALT_REF_LOCI_1	Second Pass	NW_003315963.1	Chr19\|NW_0 03315963.1	107,276	107,577
nsv4747977	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	34,743,267	34,743,568

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16278725	deletion	Sequencing	Split read mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16278725	Remapped	Perfect	NW_003315963.1:g.1 07276_107577del	GRCh38.p12	Second Pass	NW_003315963.1	Chr19\|NW_0 03315963.1	107,276	107,577
nssv16278725	Remapped	Perfect	NC_000019.10:g.342 52362_34252663del	GRCh38.p12	First Pass	NC_000019.10	Chr19	34,252,362	34,252,663
nssv16278725	Submitted genomic		NC_000019.9:g.3474 3267_34743568del	GRCh37 (hg19)		NC_000019.9	Chr19	34,743,267	34,743,568

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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