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dbVar

Database of genomic structural variation

nsv4745818

Organism: Homo sapiens

Study:nstd199 (Quan et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:57

Publication(s):Quan et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 283 SVs from 45 studies. See in: genome view

Remapped(Score: Perfect):21,141,757-21,141,813

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4745818	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	21,141,757	21,141,813
nsv4745818	Remapped	Perfect	GRCh38.p12	PATCHES	Second Pass	NW_009646199.1	Chr5\|NW_00 9646199.1	43,411	43,467
nsv4745818	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	21,141,866	21,141,922

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16296012	deletion	Sequencing	Split read mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16296012	Remapped	Perfect	NW_009646199.1:g.4 3411_43467del	GRCh38.p12	Second Pass	NW_009646199.1	Chr5\|NW_00 9646199.1	43,411	43,467
nssv16296012	Remapped	Perfect	NC_000005.10:g.211 41757_21141813del	GRCh38.p12	First Pass	NC_000005.10	Chr5	21,141,757	21,141,813
nssv16296012	Submitted genomic		NC_000005.9:g.2114 1866_21141922del	GRCh37 (hg19)		NC_000005.9	Chr5	21,141,866	21,141,922

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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