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dbVar

Database of genomic structural variation

nsv4735428

Organism: Homo sapiens

Study:nstd199 (Quan et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:168

Publication(s):Quan et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 182 SVs from 45 studies. See in: genome view

Remapped(Score: Perfect):77,245,968-77,246,135

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4735428	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	77,245,968	77,246,135
nsv4735428	Remapped	Perfect	GRCh38.p12	ALT_REF_LOCI_1	Second Pass	NW_003315955.1	Chr17\|NW_0 03315955.1	36,861	37,028
nsv4735428	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	75,242,050	75,242,217

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16266502	deletion	Sequencing	Split read mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16266502	Remapped	Perfect	NW_003315955.1:g.3 6861_37028del	GRCh38.p12	Second Pass	NW_003315955.1	Chr17\|NW_0 03315955.1	36,861	37,028
nssv16266502	Remapped	Perfect	NC_000017.11:g.772 45968_77246135del	GRCh38.p12	First Pass	NC_000017.11	Chr17	77,245,968	77,246,135
nssv16266502	Submitted genomic		NC_000017.10:g.752 42050_75242217del	GRCh37 (hg19)		NC_000017.10	Chr17	75,242,050	75,242,217

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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