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dbVar

Database of genomic structural variation

nsv4734106

Organism: Homo sapiens

Study:nstd199 (Quan et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:343

Publication(s):Quan et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 190 SVs from 46 studies. See in: genome view

Remapped(Score: Perfect):77,239,878-77,240,220

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4734106	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	77,239,878	77,240,220
nsv4734106	Remapped	Good	GRCh38.p12	ALT_REF_LOCI_1	Second Pass	NW_003315955.1	Chr17\|NW_0 03315955.1	30,771	31,111
nsv4734106	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	75,235,960	75,236,302

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16278524	deletion	Sequencing	Split read mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16278524	Remapped	Good	NW_003315955.1:g.3 0771_31111del	GRCh38.p12	Second Pass	NW_003315955.1	Chr17\|NW_0 03315955.1	30,771	31,111
nssv16278524	Remapped	Perfect	NC_000017.11:g.772 39878_77240220del	GRCh38.p12	First Pass	NC_000017.11	Chr17	77,239,878	77,240,220
nssv16278524	Submitted genomic		NC_000017.10:g.752 35960_75236302del	GRCh37 (hg19)		NC_000017.10	Chr17	75,235,960	75,236,302

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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