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dbVar

Database of genomic structural variation

nsv4731217

Organism: Homo sapiens

Study:nstd199 (Quan et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:89

Publication(s):Quan et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 257 SVs from 41 studies. See in: genome view

Remapped(Score: Perfect):154,443,606-154,443,694

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4731217	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	154,443,606	154,443,694
nsv4731217	Remapped	Perfect	GRCh38.p12	PATCHES	Second Pass	NW_012132919.1	Chr7\|NW_01 2132919.1	21,255	21,343
nsv4731217	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	154,140,691	154,140,779

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16291893	deletion	Sequencing	Split read mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16291893	Remapped	Perfect	NW_012132919.1:g.2 1255_21343del	GRCh38.p12	Second Pass	NW_012132919.1	Chr7\|NW_01 2132919.1	21,255	21,343
nssv16291893	Remapped	Perfect	NC_000007.14:g.154 443606_154443694de l	GRCh38.p12	First Pass	NC_000007.14	Chr7	154,443,606	154,443,694
nssv16291893	Submitted genomic		NC_000007.13:g.154 140691_154140779de l	GRCh37 (hg19)		NC_000007.13	Chr7	154,140,691	154,140,779

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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