nsv4722102
- Organism: Homo sapiens
- Study:nstd186 (NCBI Curated Common Structural Variants)
- Variant Type:mobile element insertion
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:nsv4567162 from gnomAD Structural Variants. For a full list of variants now included in nstd186, refer to the mapping file provided here.
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 204 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 14 SVs from 12 studies. See in: genome view
Overlapping variant regions from other studies: 204 SVs from 34 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4722102 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 21,107,388 | 21,107,388 |
| nsv4722102 | Remapped | Perfect | GRCh38.p12 | PATCHES | Second Pass | NW_009646199.1 | Chr5|NW_00 9646199.1 | 9,042 | 9,042 |
| nsv4722102 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 21,107,497 | 21,107,497 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16218666 | line1 insertion | Curated | Curated |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16218666 | Remapped | Perfect | NW_009646199.1:g.9 042_9043ins? | GRCh38.p12 | Second Pass | NW_009646199.1 | Chr5|NW_00 9646199.1 | 9,042 | 9,042 |
| nssv16218666 | Remapped | Perfect | NC_000005.10:g.211 07388_21107389ins? | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,107,388 | 21,107,388 |
| nssv16218666 | Submitted genomic | NC_000005.9:g.2110 7497_21107498ins? | GRCh37 (hg19) | NC_000005.9 | Chr5 | 21,107,497 | 21,107,497 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16218666 | 0.272 | 5908 | 21694 |