nsv4679893
- Organism: Homo sapiens
- Study:nstd189 (Perez-Palma et al. 2020)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:36,529,004
- Publication(s):Pérez-Palma et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 57187 SVs from 112 studies. See in: genome view
Overlapping variant regions from other studies: 57238 SVs from 112 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4679893 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 114,525,195 | 151,054,198 |
| nsv4679893 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000023.10 | ChrX | 113,759,648 | 150,222,670 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16209947 | deletion | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16209947 | Remapped | Good | NC_000023.11:g.(?_ 114525195)_(151054 198_?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 114,525,195 | 151,054,198 |
| nssv16209947 | Submitted genomic | NC_000023.10:g.(?_ 113759648)_(150222 670_?)del | GRCh37.p13 | NC_000023.10 | ChrX | 113,759,648 | 150,222,670 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) |
|---|---|
| nssv16209947 | <0.001 |