nsv4457729
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:221,028
- Description:GRCh37/hg19 19q13.43(chr19:58369898-58590924)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 817 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 817 SVs from 73 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4457729 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 57,858,530 | 58,079,557 |
nsv4457729 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 58,369,898 | 58,590,924 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15776062 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV000848536.2, VCV000687845.2 | 3 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15776062 | Remapped | Perfect | NC_000019.10:g.(?_ 57858530)_(5807955 7_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 57,858,530 | 58,079,557 |
nssv15776062 | Submitted genomic | NC_000019.9:g.(?_5 8369898)_(58590924 _?)dup | GRCh37 (hg19) | NC_000019.9 | Chr19 | 58,369,898 | 58,590,924 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15776062 | GRCh37: NC_000019.9:g.(?_58369898)_(58590924_?)dup | copy number gain | unknown | not provided | Uncertain significance | ClinVar | RCV000848536.2, VCV000687845.2 | 3 |