Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv4103648

Organism: Homo sapiens

Study:nstd166 (gnomAD Structural Variants)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,731

Publication(s):gnomAD_Structural_Variants

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 33 SVs from 5 studies. See in: genome view

Remapped(Score: Perfect):55,368,740-55,371,470

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4103648	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	55,368,740	55,371,470
nsv4103648	Submitted genomic		GRCh37.p13	Primary Assembly		NC_000004.11	Chr4	56,234,907	56,237,637

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv15889050	deletion	Sequencing	Other

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv15889050	Remapped	Perfect	NC_000004.12:g.553 68740_55371470del	GRCh38.p12	First Pass	NC_000004.12	Chr4	55,368,740	55,371,470
nssv15889050	Submitted genomic		NC_000004.11:g.562 34907_56237637del	GRCh37.p13		NC_000004.11	Chr4	56,234,907	56,237,637

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv15889050	4.6e-005	1	21694

You are here: NCBI