prok-gene

Name

dataformat excel prok-gene - Convert Prokaryote Gene Report into an Excel workbook

Synopsis

dataformat excel prok-gene [flags]

Description

Convert Prokaryote Gene Report into an Excel workbook.

Refer to NCBI’s download and install documentation for information about getting started with the command-line tools.

Examples

  dataformat excel prok-gene --inputfile prokaryote_package/ncbi_dataset/data/data_report.jsonl --outputfile prokaryote.xlsx
  dataformat excel prok-gene --package prokaryote-package.zip --outputfile prokaryote.xlsx

Options

      --fields strings      Comma-separated list of fields
      --force               Force dataformat to run without type check prompt
  -h, --help                help for prok-gene
      --inputfile string    Input file (default "/dev/stdin")
      --outputfile string   Excel workbook file
      --package string      Data package (zip archive), inputfile parameter is relative to the root path inside the archive

Fields