ClinVar for Gene (Select 9338) - ClinVar - NCBI

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	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 3068455	NM_004780.3(TCEAL1):c.88_89insT (p.Glu30fs)	TCEAL1 (E30fs)	Insertion (frameshift variant)	Neurodevelopmental disorder with gait disturbance, dysmorphic facies, and behavioral abnormalities, X-linked	GUncertain significance
Select item 3024654	GRCh37/hg19 Xq12-28(chrX:67292994-155240074)x3	ALG13, AMMECR1 +488 more	Copy number gain	not provided	GPathogenic
Select item 2691408	NM_004780.3(TCEAL1):c.413A>G (p.Lys138Arg)	TCEAL1 (K138R)	Single nucleotide variant (missense variant)	not specified	GLikely benign
Select item 2685715	GRCh37/hg19 Xq21.31-25(chrX:91274467-126799984)x1	ACSL4, AGTR2 +175 more	Copy number loss	not provided	GPathogenic
Select item 2685000	GRCh37/hg19 Xq21.33-22.3(chrX:96349060-106950847)x3	ARL13A, ARMCX1 +80 more	Copy number gain	not provided	GPathogenic
Select item 2684996	GRCh37/hg19 Xq21.1-24(chrX:77212972-118576590)x3	ACSL4, AGTR2 +159 more	Copy number gain	not provided	GPathogenic
Select item 2673278	NM_004780.3(TCEAL1):c.311_314del (p.Glu104fs)	TCEAL1 (E104fs)	Microsatellite (frameshift variant)	Neurodevelopmental disorder with gait disturbance, dysmorphic facies, and behavioral abnormalities, X-linked	GLikely pathogenic
Select item 2673277	NM_004780.3(TCEAL1):c.324_333del (p.Ser109fs)	TCEAL1 (S109fs)	Deletion (frameshift variant)	Neurodevelopmental disorder with gait disturbance, dysmorphic facies, and behavioral abnormalities, X-linked	GLikely pathogenic
Select item 2673276	NM_004780.3(TCEAL1):c.151G>T (p.Glu51Ter)	TCEAL1 (E51*)	Single nucleotide variant (nonsense)	Neurodevelopmental disorder with gait disturbance, dysmorphic facies, and behavioral abnormalities, X-linked	GLikely pathogenic
Select item 2673275	NM_004780.3(TCEAL1):c.61G>T (p.Glu21Ter)	TCEAL1 (E21*)	Single nucleotide variant (nonsense)	Neurodevelopmental disorder with gait disturbance, dysmorphic facies, and behavioral abnormalities, X-linked	GLikely pathogenic
Select item 2661101	NM_004780.3(TCEAL1):c.276A>G (p.Val92=)	TCEAL1	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2661100	NM_004780.3(TCEAL1):c.6C>T (p.Asp2=)	LOC130068513, TCEAL1	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2580920	NM_004780.3(TCEAL1):c.124_138dup (p.Glu46_Glu47insGlnSerSerGluGlu)	TCEAL1	Duplication (inframe_insertion)	Neurodevelopmental disorder with gait disturbance, dysmorphic facies, and behavioral abnormalities, X-linked	GUncertain significance
Select item 2573533	NM_004780.3(TCEAL1):c.84dup (p.Pro29fs)	TCEAL1 (P29fs)	Duplication (frameshift variant)	not specified	GUncertain significance
Select item 2506546	GRCh37/hg19 Xp22.33-q28(chrX:200855-155240074)	BMX, CXorf38 +821 more	Copy number gain	Klinefelter syndrome	GPathogenic
Select item 2298985	NM_004780.3(TCEAL1):c.148C>T (p.Pro50Ser)	TCEAL1 (P50S)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 2263861	NM_004780.3(TCEAL1):c.98C>T (p.Ser33Phe)	TCEAL1 (S33F)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 1809489	GRCh37/hg19 Xq22.2(chrX:102615980-102962669)x2	BEX3, MORF4L2 +4 more	Copy number gain	not provided	GUncertain significance
Select item 1809321	GRCh37/hg19 Xq22.2(chrX:102625535-103022965)x3	BEX3, MORF4L2 +5 more	Copy number gain	not provided	GUncertain significance
Select item 1808673	GRCh37/hg19 Xq21.33-24(chrX:93805850-118913329)x1	ACSL4, AGTR2 +133 more	Copy number loss	not provided	GPathogenic
Select item 1710513	GRCh37/hg19 Xq21.1-24(chrX:76794355-119282836)x3	CAPN6, CENPI +176 more	Copy number gain	not provided	GPathogenic
Select item 1707442	GRCh37/hg19 Xp22.2-q28(chrX:11522765-155233731)x1	MIR224, MIR424 +793 more	Copy number loss	See cases	GPathogenic
Select item 1706520	GRCh37/hg19 Xq21.1-28(chrX:77670699-155233731)x1	NXF5, NXT2 +414 more	Copy number loss	See cases	GPathogenic
Select item 1704345	GRCh37/hg19 Xp22.33-q28(chrX:61545-155226048)x2	CT55, CT83 +821 more	Copy number gain	Klinefelter syndrome	GPathogenic
Select item 1703584	GRCh37/hg19 Xq11.1-28(chrX:62685885-155233731)	H2AB3, H2BW1 +502 more	Copy number loss	Turner syndrome	GPathogenic
Select item 1703580	GRCh37/hg19 Xp22.33-q28(chrX:1-155270560)	ABCB7, ABCD1 +822 more	Copy number loss	Turner syndrome	GPathogenic
Select item 1703579	GRCh37/hg19 Xp22.33-q28(chrX:1-155270560)	SCML2, SEPTIN6 +822 more	Copy number gain	Hypotonia +2 more	GPathogenic
Select item 1700036	NM_004780.3(TCEAL1):c.346G>A (p.Asp116Asn)	TCEAL1 (D116N)	Single nucleotide variant (missense variant)	See cases	GUncertain significance
Select item 1700035	NM_004780.3(TCEAL1):c.169del (p.Leu57fs)	TCEAL1 (L57fs)	Deletion (frameshift variant)	See cases	GLikely pathogenic
Select item 1700034	Single allele	TCEAL1, TCEAL3 +1 more	Deletion	See cases	GLikely pathogenic
Select item 1700033	Single allele	TCEAL1	Deletion	See cases	GLikely pathogenic
Select item 1700032	NM_004780.3(TCEAL1):c.269G>A (p.Cys90Tyr)	TCEAL1 (C90Y)	Single nucleotide variant (missense variant)	See cases	GLikely pathogenic
Select item 1700031	NM_004780.3(TCEAL1):c.259C>T (p.Gln87Ter)	TCEAL1 (Q87*)	Single nucleotide variant (nonsense)	See cases	GLikely pathogenic
Select item 1700030	NM_004780.3(TCEAL1):c.299_302del (p.Gly100fs)	TCEAL1 (G100fs)	Microsatellite (frameshift variant)	See cases	GLikely pathogenic
Select item 1700029	NM_004780.3(TCEAL1):c.447G>A (p.Trp149Ter)	TCEAL1 (W149*)	Single nucleotide variant (nonsense)	See cases	GLikely pathogenic
Select item 1526836	GRCh37/hg19 Xq22.1-22.2(chrX:102582446-103203574)	BEX3, MORF4L2 +9 more	Copy number gain	not specified	GPathogenic
Select item 1526834	GRCh37/hg19 Xq22.1-24(chrX:101982475-116885339)	ACSL4, AGTR2 +77 more	Copy number gain	not specified	GPathogenic
Select item 1341233	GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x1	CXorf51B, GAGE12H +821 more	Copy number loss	not provided	GPathogenic
Select item 1341223	GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x3	ABCB7, ABCD1 +821 more	Copy number gain	not provided	GPathogenic
Select item 1209858	GRCh37/hg19 Xq21.32-23(chrX:91829757-113050225)x1	BEX3, BEX4 +110 more	Copy number loss	Xq21.32q23 deletion	GPathogenic
Select item 1180551	GRCh37/hg19 Xp22.33-q28(chrX:60000-155234966)x1	CXorf49B, CXorf51A +821 more	Copy number loss	not provided	GPathogenic
Select item 1077188	Single allele	BEX2, BEX3 +12 more	Duplication	Pelizaeus-Merzbacher disease +1 more	GPathogenic
Select item 992648	GRCh37/hg19 Xp11.21-q28(chrX:56469080-155233731)x3	ABCB7, ABCD1 +510 more	Copy number gain	not provided	GPathogenic
Select item 983156	GRCh37/hg19 Xp11.21-q28(chrX:55507789-155198481)x3	ABCB7, ABCD1 +514 more	Copy number gain	See cases	GPathogenic
Select item 979836	GRCh37/hg19 Xq21.33-28(chrX:94264404-155233731)x1	ABCD1, ACSL4 +387 more	Copy number loss	not provided	GPathogenic
Select item 979829	GRCh37/hg19 Xq21.1-25(chrX:77514079-127770854)x1	ACSL4, ACTRT1 +201 more	Copy number loss	not provided	GPathogenic
Select item 832054	NC_000023.10:g.(?_102831398)_(103220942_?)dup	MORF4L2, PLP1 +6 more	Duplication	Hereditary spastic paraplegia 2	GPathogenic
Select item 830310	NC_000023.10:g.102632399_103221016del	TCEAL1, RAB9B +8 more	Deletion	Global developmental delay	GPathogenic
Select item 816375	GRCh37/hg19 Xq22.2(chrX:102742391-103109211)x2	MORF4L2, PLP1 +6 more	Copy number gain	not provided	GPathogenic
Select item 816368	GRCh37/hg19 Xq21.1-28(chrX:84387417-155233731)x1	ABCD1, ACSL4 +398 more	Copy number loss	not provided	GPathogenic
Select item 816364	GRCh37/hg19 Xq21.1-28(chrX:78444738-155233731)x1	ABCD1, ACSL4 +410 more	Copy number loss	not provided	GPathogenic
Select item 691853	GRCh37/hg19 Xq22.1-22.2(chrX:102543473-103398234)x0	BEX2, BEX3 +15 more	Copy number loss	not provided	GUncertain significance
Select item 691849	GRCh37/hg19 Xq22.1-22.3(chrX:101029649-106702784)x1	FAM199X, GPRASP1 +51 more	Copy number loss	Early Onset Neurological Disease Trait	GPathogenic
Select item 691848	GRCh37/hg19 Xq22.1-22.3(chrX:102066350-105409822)x1	BEX1, BEX2 +27 more	Copy number loss	Early Onset Neurological Disease Trait	GPathogenic
Select item 691847	GRCh37/hg19 Xq22.1-22.3(chrX:102436725-105520605)x1	BEX2, BEX3 +25 more	Copy number loss	Early Onset Neurological Disease Trait	GUncertain significance
Select item 691846	GRCh37/hg19 Xq22.1-22.2(chrX:100866604-103411980)x1	ARMCX2, ARMCX3 +40 more	Copy number loss	Early Onset Neurological Disease Trait	GPathogenic
Select item 691845	GRCh37/hg19 Xq22.2(chrX:102615641-103309503)x1	H2BW2, MORF4L2 +10 more	Copy number loss	Early Onset Neurological Disease Trait	GPathogenic
Select item 688137	GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x1	RBMXL3, RENBP +821 more	Copy number loss	not provided	GPathogenic
Select item 687519	GRCh37/hg19 Xp11.21-q28(chrX:54941868-155233731)x1	RBMX2, RBMXL3 +525 more	Copy number loss	not provided	GUncertain significance
Select item 685566	GRCh37/hg19 Xp11.1-q28(chrX:58455352-155233731)x1	AMOT, APLN +503 more	Copy number loss	not provided	GPathogenic
Select item 685331	GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x4	ZNF275, ZNF280C +821 more	Copy number gain	not provided	GPathogenic
Select item 684964	GRCh37/hg19 Xq21.32-28(chrX:92814516-155233731)x1	AIFM1, CXorf51A +389 more	Copy number loss	not provided	GPathogenic
Select item 626291	Single allele	PAGE2B, PAGE3 +733 more	Duplication	Syndromic X-linked intellectual disability Lubs type	GPathogenic
Select item 564878	GRCh37/hg19 Xq22.2(chrX:102767250-103236332)x2	RAB40A, TCEAL1 +7 more	Copy number gain	not provided	GPathogenic
Select item 564877	GRCh37/hg19 Xq22.2(chrX:102718261-103490112)x2	TCEAL1, MORF4L2 +12 more	Copy number gain	not provided	GPathogenic
Select item 564876	GRCh37/hg19 Xq22.1-22.2(chrX:102463087-103281330)x3	TMSB15B, TCEAL7 +15 more	Copy number gain	not provided	GUncertain significance
Select item 564875	GRCh37/hg19 Xq22.1-22.2(chrX:102443487-102995502)x3	TCEAL4, RAB40A +11 more	Copy number gain	not provided	GUncertain significance
Select item 564874	GRCh37/hg19 Xq22.1-28(chrX:99324651-155233731)x1	ABCD1, ACSL4 +385 more	Copy number loss	not provided	GPathogenic
Select item 564868	GRCh37/hg19 Xq21.31-28(chrX:91140025-155233731)x1	ABCD1, ACSL4 +390 more	Copy number loss	not provided	GPathogenic
Select item 545551	NC_000023.10:g.36649710_136649711del100000002insG	ADGRG4, ACTRT1 +541 more	Indel	Heterotaxy, visceral, 1, X-linked	GPathogenic
Select item 488014	Single allele	ARMCX3, CT47A11 +2631 more	Duplication	Autism +1 more	GPathogenic
Select item 443974	GRCh37/hg19 Xp22.33-q28(chrX:168547-155233731)	ABCB7, ABCD1 +821 more	Copy number gain	See cases	GPathogenic
Select item 443946	GRCh37/hg19 Xp22.33-q23(chrX:168547-112474026)x1	BEX5, BMP15 +541 more	Copy number loss	See cases	GPathogenic
Select item 443504	GRCh37/hg19 Xp21.2-q28(chrX:31088082-155233731)x1	ZCCHC12, ZCCHC13 +698 more	Copy number loss	See cases	GPathogenic
Select item 443106	GRCh37/hg19 Xq21.31-23(chrX:86776682-114054291)x1	ACSL4, ALG13 +115 more	Copy number loss	See cases	GPathogenic
Select item 443017	GRCh37/hg19 Xp11.21-q28(chrX:56457791-155233731)x3	ABCB7, ABCD1 +510 more	Copy number gain	See cases	GPathogenic
Select item 442945	GRCh37/hg19 Xq21.1-28(chrX:78230501-155233731)x1	RENBP, RHOXF1 +411 more	Copy number loss	See cases	GPathogenic
Select item 442821	GRCh37/hg19 Xq21.33-28(chrX:96499476-151870013)x3	ACSL4, ACTRT1 +303 more	Copy number gain	See cases	GUncertain significance
Select item 442724	GRCh37/hg19 Xp22.33-q28(chrX:168547-151304063)x1	MAGEE1, MAGEE2 +733 more	Copy number loss	See cases	GPathogenic
Select item 442712	GRCh37/hg19 Xq22.1-28(chrX:98495811-155233731)x1	ABCD1, ACSL4 +385 more	Copy number loss	See cases	GPathogenic
Select item 442646	GRCh37/hg19 Xp11.21-q28(chrX:57415659-155233731)x3	ABCB7, ABCD1 +506 more	Copy number gain	See cases	GPathogenic
Select item 442531	GRCh37/hg19 Xp11.21-q28(chrX:55000501-155230750)x3	ABCB7, ABCD1 +524 more	Copy number gain	See cases	GPathogenic
Select item 442422	GRCh37/hg19 Xq21.31-28(chrX:86900388-155233731)x1	ABCD1, ACSL4 +394 more	Copy number loss	See cases	GPathogenic
Select item 442321	GRCh37/hg19 Xp11.21-q28(chrX:57511767-155233731)x3	ARMCX5-GPRASP2, ARMCX6 +506 more	Copy number gain	See cases	GPathogenic
Select item 442001	GRCh37/hg19 Xq21.1-28(chrX:79862302-155233731)x1	ABCD1, ACSL4 +407 more	Copy number loss	See cases	GPathogenic
Select item 441843	GRCh37/hg19 Xq13.3-24(chrX:74560735-116609286)	ACSL4, AGTR2 +158 more	Copy number loss	See cases	GPathogenic
Select item 425520	GRCh37/hg19 Xp22.2-q25(chrX:11692290-121187337)x2	AWAT2, BCLAF3 +568 more	Copy number gain	not provided	GUncertain significance
Select item 395718	GRCh37/hg19 Xp22.33-q28(chrX:70297-155246585)x1	ABCB7, ABCD1 +822 more	Copy number loss	See cases	GPathogenic
Select item 395717	GRCh37/hg19 Xq22.1-22.2(chrX:99611312-103506684)	ARL13A, ARMCX1 +63 more	Copy number gain	See cases	GPathogenic
Select item 395687	GRCh37/hg19 Xp22.33-q28(chrX:70297-155255792)	ABCB7, ABCD1 +822 more	Copy number loss	See cases	GPathogenic
Select item 395686	GRCh37/hg19 Xp22.33-q28(chrX:70297-155255792)x4	ABCB7, ABCD1 +822 more	Copy number gain	See cases	GPathogenic
Select item 395246	GRCh37/hg19 Xq21.33-28(chrX:94043221-155246585)x1	IRAK1, IRS4 +388 more	Copy number loss	See cases	GPathogenic
Select item 394846	GRCh37/hg19 Xq21.33-26.1(chrX:95498487-129063677)x3	ACSL4, ACTRT1 +180 more	Copy number gain	See cases	GPathogenic
Select item 394706	GRCh37/hg19 Xp22.33-q28(chrX:60701-155246225)x3	ABCB7, ABCD1 +822 more	Copy number gain	See cases	GPathogenic
Select item 394672	GRCh37/hg19 Xp22.33-q28(chrX:318707-155224707)x1	EIF2S3, ELF4 +821 more	Copy number loss	See cases	GPathogenic
Select item 394066	GRCh37/hg19 Xq13.2-27.1(chrX:72224362-139262228)x4	ABCB7, AKAP14 +299 more	Copy number gain	See cases	GPathogenic
Select item 394013	GRCh37/hg19 Xp22.33-q28(chrX:71267-155255792)x1	MAGEB17, MAGEB18 +822 more	Copy number loss	See cases	GPathogenic
Select item 253652	GRCh37/hg19 Xp22.33-q28(chrX:71267-155246643)x3	ABCB7, ABCD1 +822 more	Copy number gain	See cases	GPathogenic
Select item 253624	GRCh37/hg19 Xp22.33-q28(chrX:60701-155246271)x3	GAGE12F, GAGE12G +822 more	Copy number gain	See cases	GPathogenic
Select item 253616	GRCh37/hg19 Xq11.1-28(chrX:62063537-155246643)x3	ABCB7, ABCD1 +504 more	Copy number gain	See cases	GPathogenic

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