1JPZ,3BEN,4KPA,1BVY,2X7Y,3NPL,4DUB,4DTW,3CBD


Conserved Protein Domain Family
CYP120A1

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cd11068: CYP120A1 
Click on image for an interactive view with Cn3D
cytochrome P450 family 102, subfamily A, polypeptide 1, also called bifunctional cytochrome P450/NADPH--P450 reductase
Cytochrome P450 102A1, also called cytochrome P450(BM-3) or P450BM-3, is a bifunctional cytochrome P450/NADPH--P450 reductase. These proteins fuse an N-terminal cytochrome p450 with a C-terminal cytochrome p450 reductase (CYPOR). It functions as a fatty acid monooxygenase, catalyzing the hydroxylation of fatty acids at omega-1, omega-2 and omega-3 positions, with activity towards fatty acids with a chain length of 9-18 carbons. Its NADPH-dependent reductase activity (via the C-terminal domain) allows electron transfer from NADPH to the heme iron of the N-terminal cytochrome P450. CYP120A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Statistics
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PSSM-Id: 410691
Aligned: 40 rows
Threshold Bit Score: 530.605
Created: 22-Jan-2010
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
heme bindingchemical
Conserved site includes 24 residues -Click on image for an interactive view with Cn3D
Feature 1:heme binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                      #     #           ##        #   
1JPZ_A      28 PVQALMKIADEL--GEIFKFEAPGr-VTRYLSS-QRLIKEACDesrfdKNLSQALKFVRDFa-GDGLFTSWthekNWKKA 102  Bacillus megaterium
BAC75137    47 PVQDSLRIGRRL--GPVFRRKAFGk-EIVFVGG-ADLAAELADesrfaKHVGLGVANLRPVa-GDGLFTAYnhepNWQLG 121  Streptomyces ave...
ACY23136    39 PILSVLALGTQF--GGIYELKVFRq-KFVFVAS-AELTAELCDetrfcKTLPPAIAALRDYg-GDGLFTAYttepNWQLA 113  Gordonia bronchi...
CAR47816    66 PVQREAQFVQEL--GDVFEISILGr-KVIVVGG-GDAAAEVFDetrfaKAVVPPVSNLRELa-GDGLFTAFnsepAWAQA 140  Rhodococcus sp. ...
EDY51256    15 FTEHTLREARAL--GPLFNLRFFDt-DCWMVSG-PELVAELCDet-rfRKSVQPIAAVREFa-GDGLFTAFgdepNWRKA 88   Streptomyces cla...
BAE46296    81 PIQKEMALASKL--GPIFEWKIVNn-RVTVVSG-VDLVAEVNNealwaKSVGLPILKLRKVa-EDGLFTAFnsepNWRKA 155  Rhodococcus eryt...
ACV78954    27 AFTDLQRLADEL--GPIYALDMPGyhDQVVLTG-PDLFGEACDd---sRFDKSPAQRLRAVl-GDGLFTAFtdsrAWQRG 99   Nakamurella mult...
BAD60683    38 PTLTSLRDAEQL--GGIFERRLVDw-PMIVVSD-SELITEICDernwaKHLGVPLRKMRHIa-RDGLFTARndepNWAKA 112  Nocardia farcini...
ABP47269    28 SADILTRPPSDPglGPVFEFRFLGa-RYVVAAS-ADAVAEVNDerrfcKHVGPDIDALRIMg-GDGLFTAYneepNWQRA 104  Mycobacterium gi...
ACY23993    27 PVHSELALVESL--GALYKLNMGLg-RELVVTTdHNVINDTSDeatwtKFLSSPFVLMRETmtGNGLLTANnsdpLWSKA 103  Gordonia bronchi...
Feature 1             #                                                                        
1JPZ_A     103 HNILLPSFSqqAMKGYHAMMVDIAVQLVQKWE-RLNAde-hIEVPEDMTRLTLDTIGLCGfnyrfns-fyrdqphPFITS 179  Bacillus megaterium
BAC75137   122 HDVLAPGFSreAMAGYHPMMLAVTERLIDHWD-REQTagraVDVPGDMTKLTLETIARTGfghdfgs-ferarphPFVTA 199  Streptomyces ave...
ACY23136   114 HDLLMPAFTkpAMRSYHRIMLDTAAELFAYWD-AIPGg--rVDVTRDMTKLTMETLSRAAfsrdfgs-fttprphPFVQS 189  Gordonia bronchi...
CAR47816   141 HNVLMPAFSqaSMRSYHDAMVECIDQLCAYWA-DTASge-pVDISSDMNRLTLEVIGRTGfgysfns--fapgrhPFVES 216  Rhodococcus sp. ...
EDY51256    89 HNILMPAFSynALRAYHPTMVTVARRVLDAWD-RNAGt--pVDVPEDMTRLTLDTIGLCGfghdfec-ferttphPFITA 164  Streptomyces cla...
BAE46296   156 HNILSEGFSrsALRNYHPSMLRALGGLTDSWD-RVADagetIDASSDANKLALDVIGLAGfgydfas--figeehPFVGA 232  Rhodococcus eryt...
ACV78954   100 HRIIAPAFTgaAISRLYPSIVDPIQQLAERLV-RMEPgs-dVDVPTLTSAMTLDVVGLCLfsyrfgn-vytntptPFLQA 176  Nakamurella mult...
BAD60683   113 HAVLAPAFTkeAMRSYHQTMLTTIGELLDYWAkRDGQw---VDVGEDMNKLTLEIIARTGfdytfds-ftrsevhPFVAA 188  Nocardia farcini...
ABP47269   105 HDLLMPAFSqqAMRGYHSAMLDAADGLVARWD-GKARtgasVDVPADATRVTLETIGQCAaghpfgc-fdtedphPFVEH 182  Mycobacterium gi...
ACY23993   104 NDLIAPGFSrgALVSYHPIMIEAVNQLCDMWEtSQGSw---VDVSRDMNRLTMEVIARAGfsdtfnalgpesssaSIVDE 180  Gordonia bronchi...
Feature 1                                                                                      
1JPZ_A     180 MVRALDEAMNKLQranpddpa--ydenkrqfQEDIKVMNDLVDKiiadrkasgeqs----ddllthmlngkDPETGEPLD 253  Bacillus megaterium
BAC75137   200 MVGTLTYAQRRNVvpeplapll-lrtatrrnAADLAYLNRTVDAlvrarrttsge-----gdlldrmldtaRPGTGERLA 273  Streptomyces ave...
ACY23136   190 MITALRTSRRKGAlrtapggrlygrylahraAPVTDYAYEMVDEmiadrvdgphr-----ddllgimlkvrHPETGERLS 264  Gordonia bronchi...
CAR47816   217 MSRAMAYVSQTANdvpvlreil-gwkamrqnPKDIALMKTTVDQviaarrsgetpr---qddllqrmlenpDPQTGEMMS 292  Rhodococcus sp. ...
EDY51256   165 MVSALDHAQRKDTfipgldfl--rrgaearqRINIETMNRLADDivrrrraasdggadsaddllglmlhaeDKDTGQPLD 242  Streptomyces cla...
BAE46296   233 MSRVLAHVNSTSNdipflrklr-gngadlqnEKDIALLRTVVDNviaerqskpgeh---qddlldlmlhsaDAETGEKLD 308  Rhodococcus eryt...
ACV78954   177 LDRALTLLAEGAGkkdlyavm--hpratrdlRESAEVLISFVDDfvkrrrsmpdgna--pddllqhmltaaDPDTGERLS 252  Nakamurella mult...
BAD60683   189 MLRGLTYISRNSNmppflqkti-garaaarhSRDITYVRTVVDDvikarqasgtvgd--hhdlldrmltvpDPASDELLD 265  Nocardia farcini...
ABP47269   183 MVAGLKGSDWVGVlretvlpnffarraerrvRRHAVQMHRIADEivserlrdg----------lghhddllELMLTSDLD 252  Mycobacterium gi...
ACY23993   181 LTQTLRALSATANslpilaa-----lrssrlKRGAQSLRDAATRivaqhrsrsds-----hghtdlldrmcPAGSSDALP 250  Gordonia bronchi...
Feature 1                #  ##  ##  #                                                         #
1JPZ_A     254 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVdpvps---ykqvKQLKYVGMVLNEALRLWPT 330  Bacillus megaterium
BAC75137   274 PENIRRQVITFLVAGHETTSGALSFALHYLSRHPDVAARARAEVDRVWGgtarp--gydqvAKLRYVRRVLDESLRLWPT 351  Streptomyces ave...
ACY23136   265 RLNMRYQILTFLVAGHETTSGALSFTLYFLSQNPECLRRAQREADEILGtdpdaeptfeqvSKFRYIRRCLDESLRLWPT 344  Gordonia bronchi...
CAR47816   293 NQSIRNQVLTFLIAGHETTAGLLSFALHYLSLNPEIVERAREEIDEVFGtggvpv-rfeqvAKLRYVRRIVDETLRLWPS 371  Rhodococcus sp. ...
EDY51256   243 DMNIRYQMLTFLIAGHETTSGALSFALYYLLKNPSVLAAARAETDALWGtdpdpdptyediGRLHYLRQVLNESLRLWPT 322  Streptomyces cla...
BAE46296   309 PVNIRNQVFTFLVAGNETTAGTLAFALYFLSRHPDVADTARAEVADVTAgetpa---fedvARMRYLRRVVDETLRLWPS 385  Rhodococcus eryt...
ACV78954   253 DIEVRQQTLTLLIAGHETTSGTLAFALHHLAAQPQVQDWAREQVDEVLGsdrsvlptmeqvGQLDRIHQIVDETLRLHPT 332  Nakamurella mult...
BAD60683   266 TTNVRSQILTMLVAGHETSAGVLAFALYELSRRPELVAAARAEIETRFAdgdlstiayddvAKLRTLRRIVDETLRLYPV 345  Nocardia farcini...
ABP47269   253 PANIRYQLINFLVAGHETTSGALSFALYFLSRHPEVADRARAEVAEVWGdderp--gfeliAKLRYVRRVLDEALRLQPT 330  Mycobacterium gi...
ACY23993   251 RQNAVDQCLTLLAAGNETTAGTLAFCLHYLAQDLALQSSVRNEVKSVGAvaglp---yeaiSKLRITRRVVDESLRLWPV 327  Gordonia bronchi...
Feature 1      #  #                                                                   ###   ###
1JPZ_A     331 APAFSLYAKEdTVLg----GEYPLEKGDELMVLIPQLHRDKtIWGDDVEEFRPERFENPs---aIPQHAFKPFGNGQRAC 403  Bacillus megaterium
BAC75137   352 APAFAREARRdTVLg----GVHPMREGAWALVLTAMLHRDPgVWGADAERFDPDRFDAQav-rsRAAHTFKPFGTGARAC 426  Streptomyces ave...
ACY23136   345 VPAFSRRPVAdTVLa----GKYPMRSQDWALIMLGQVHRDP-AVWENPETFDPDRFLPEei-rkRPAHSYKPFGTGMRAC 418  Gordonia bronchi...
CAR47816   372 GPAFFRKARQeTTL-----AGYPIRKSETILVVLLALHRDPqLWGDDVERFDPDRFLPPav-raRPAHAYKPFGVGARAC 445  Rhodococcus sp. ...
EDY51256   323 APAFAVEPLEdTVIg----GRYPVHKGQPLTVLTPVLHRDP-AWGDNPELFDPARFDPEqa-dsRPGHLYKPFGNGERSC 396  Streptomyces cla...
BAE46296   386 APGYFRKVRTdTTLg----GRYDMPKGSWVFVLLPQLHRDP-VWGEDPESFDPDRFKPEnv-kkRPAHAYRPFGTGPRAC 459  Rhodococcus eryt...
ACV78954   333 APVLLRHPRRaTTIg----GGYHLDAGATILIPLPKVHIDPaIWGPDAEVFRPRRWESVg---qLPAGAYQPFGVGVRGC 405  Nakamurella mult...
BAD60683   346 APGFFREARHeTTIg---gGRYRFGPGDWVLVLTLHAHRDPaTWGPDAGEFQPDRWLPErmrslDGRQVFKPFGTGLRAC 422  Nocardia farcini...
ABP47269   331 VPGYYREAREdTVLa----GVHPMRQGDWVLAMTMALHRDP-RWGGDPDAFDPDRFAPDrv-raRPAGLYKPFGTGPRSC 404  Mycobacterium gi...
ACY23993   328 APAYFRRARQdTVVhsrdhGPVSVPKNTVVMVLLLGAHRDPtTWGSDAAQFRPDRFDPKel-rrFPDRVYRPFGVGPRSC 406  Gordonia bronchi...
Feature 1      ##   #                                               
1JPZ_A     404 IGQQFALHEATLVLGMMLKHFDFed--hTNYELDIKETLTLKPEGFVVKAKSK 454  Bacillus megaterium
BAC75137   427 IGRQFALHEATLVLGLLLRRYELra--ePGYRLRVAERLTLMPEGLRLRLDRR 477  Streptomyces avermitilis MA-4680
ACY23136   419 IGRQFALHESVLVLARLVHRYDItp--dADYRLDVTERLTMAPKNFHINLTPR 469  Gordonia bronchialis DSM 43247
CAR47816   446 IGRQFALHEAILALARVLTHFDIap--vPGYELKVEELLTIRPKNLRLVMRPR 496  Rhodococcus sp. PY11
EDY51256   397 IGRQFALHEATLMLGLIVHRYRLid--hADYELKIKETLTIKPDGFTLVPVRR 447  Streptomyces clavuligerus ATCC 27064
BAE46296   460 IGRQFALHEAVLALAIILQRYNFqs--dPEYKLDIRETLSLKPVGFELSLQRR 510  Rhodococcus erythropolis PR4
ACV78954   406 IGRLFALAEARATLAVLLHRFEIrd--pHPAPLTIALHITLKPQNVTLRFLAR 456  Nakamurella multipartita DSM 44233
BAD60683   423 IGRQFAYHEIVLALAHILHTFEFtp--dPGYELDIAEQITLKPHRFRLRLNHR 473  Nocardia farcinica IFM 10152
ABP47269   405 IGRQFALHEAVLLLAVLLRRYDLvp--ePGYQLQVAQRLTLMPKDFRLTLRRR 455  Mycobacterium gilvum PYR-GCK
ACY23993   407 IGRQFAIHEAILTLAGIVERYHLepqakTHYQLQADEMITLKPRGLRLKVEAV 459  Gordonia bronchialis DSM 43247

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