1JTK,1UAQ


Conserved Protein Domain Family
cytidine_deaminase-like

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cd00786: cytidine_deaminase-like 
Click on image for an interactive view with Cn3D
Cytidine and deoxycytidylate deaminase zinc-binding region. The family contains cytidine deaminases, nucleoside deaminases, deoxycytidylate deaminases and riboflavin deaminases. Also included are the apoBec family of mRNA editing enzymes. All members are Zn dependent. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a water molecule to form a hydroxide ion that performs a nucleophilic attack on the substrate.
Statistics
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PSSM-Id: 238406
Aligned: 4 rows
Threshold Bit Score: 115.725
Created: 3-Feb-2003
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active siteZn binding site
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                         ###         
1JTK_A      7 ITEALKardmay--apyskFQVGAALLtk--------dgKVYRGCNIenaa------------ysmCNCAERTALFKAvs 64  Bacillus subtilis
1UAQ_A     15 MDIAYEeaalg---ykeggVPIGGCLInnk------dgsVLGRGHNMrfqk------------gsaTLHGEISTLENCgr 73  baker's yeast
P17618      6 MKLALDlakqge-gqtesnPLVGAVVVkd--------gqIVGMGAHLky----------------gEAHAEVHAIHMAga 60  Bacillus subtilis
P32321     16 PEYFMAvaflsaqrskdpnSQVGACIVnsenkivgigynGMPNGCSDdvlpwrrtaenkldtkypyVCHAELNAIMNKns 95  human
Feature 1                           ##        #                 
1JTK_A     65 egd--tefqMLAVaadtpgpVSPCGa------CRQVISELctkdVIVVLT 106 Bacillus subtilis
1UAQ_A     74 legkvykdtTLYTt------LSPCDm------CTGAIIMYg--iPRCVVG 109 baker's yeast
P17618     61 ha----egaDIYVt------LEPCShygktppCAELIINSgikrVFVAMR 100 Bacillus subtilis
P32321     96 td---vkgcSMYVa------LFPCNe------CAKLIIQAgikeVIFMSD 130 human

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