Conserved Protein Domain Family
CTH1

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COG5063: CTH1 
CCCH-type Zn-finger protein [General function prediction only]
Statistics
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PSSM-Id: 227395
Aligned: 4 rows
Threshold Bit Score: 276.933
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1731429    8 RPQVPLAFRQWPPYNYKSDPLVNSKLSQSTTSVNAGPSlISPSFLDSYANSSSLLHKPSTNLGSLKTSslLASDEVFPSS 87  fission yeast
19075093   1 MGAFGGKVDGSPWLIETISIDTNDSEEDPLGRCRCLLS-RRTSRLRNVCTCSKDGKKPSQNNTISHLS--ASLANKEQGL 77  Encephalitozoon cun...
6320355    1 --MMPNVA---PNSYYLNIPNANSTSTTTSSIFSD----LNKEYESKIKEIEEYYIKTLLNEN---------TDNDDSSS 62  baker's yeast
1706181    2 WAQLSYTR---PESQKTDLTSLFSTDQEQN-PLN------DYQYQINIRELEEYYNKTILNE-----------DNIQETS 60  baker's yeast
1731429   88 VMP-QLRPLDSSLSVSPEMDGWPWHHNSSSNPQGYAWTPSLLSSNatsYLHSGSSPHGNTSNHPSPISSLESLPSRSSTg 166 fission yeast
19075093  78 FEKrQKAHDSRASTNAPQNYPLSGRGSHANKKYQLYKTEMCRSHT---EIGYCRYGDKCQFAHSKAELRYVQRHPKYKT- 153 Encephalitozoon cun...
6320355   63 SEGhNINETDILSEYSPRPSPWLPSKPNCYHPLGDFKDLIISDS-----RPTNTLPINNPFAGNNNISTLATTEKKRKK- 136 baker's yeast
1706181   61 S------EISSAVSFSP------PKNTNAIQP-G-----LLYD-------P----QLMNPFLPSAHLNSTAPTTFKKK-- 109 baker's yeast
1731429  167 sgsldfsglanlhddsKSLAMSLNMAGVPVSVDeNSQTSFPFVHGQPESTMSRKPKLCVQSKSMTNIRNSVAKPSLVRQS 246 fission yeast
19075093 154 ----------------ETCKTFWEEGSCPYGKR-CCFIHIPNTDIANLPIHGRQRDSGKNCTGYTLGIEIDEHPHDELIY 216 Encephalitozoon cun...
6320355  137 ----------------RSLEVEINPTYTTSAF------SLPLTAENLQKLSQVDSQSTGLPYTLPIQKTTKLEPCRRAPL 194 baker's yeast
1706181  110 ------------------LEVQINPDYVPKSS------QLPLTSQNLQQLSQQKPKND---ASFSSEKESSAQPKVKS-- 160 baker's yeast
1731429  247 HSagvipikpTASNASIRNAPSNLSKQFSPSGNSPLTEAskpfvpqpsaaGDFRQAKGSAshpHGsgsSNGVAPNGKRAL 326 fission yeast
19075093 217 TK--------IEQHMPLVEGNPLDCLGKDREDTDEIWIS-----------GVSQDPSCRG---HG---LNHSHSESIKQP 271 Encephalitozoon cun...
6320355  195 QLp-------QLVNKTLYKT--ELCESFTIKGYCKY--------------GNKCQFA------HG---LNELKFKKKSNN 242 baker's yeast
1706181  161 QV--------QETPKQLYKT--ELCESFTLKGSCPY--------------GSKCQFA------HG---LGELKVKKSCKN 207 baker's yeast
1731429  327 YKTEPCKNWQISGTCRYGSKCQFAHGNQELKEPPRHP--KYKSERCRSFMMYGYCPYGLR-CCFLHDESNAQKSATIKQS 403 fission yeast
19075093 272 F--EPIIEDESS--EGIMLRRPFWESSYSKIWMDEETslFYLDGPCRRRAKGGAFAPGGa-VCKSFDKKISDFVFGNLGM 346 Encephalitozoon cun...
6320355  243 YRTKPCINWSKLGYCPYGKRCCFKHGDDKDVEIYQNAndGRSKDTALTPLPTSLAPSNNDnITNLSKPRNLHTSVKALQR 322 baker's yeast
1706181  208 FRTKPCVNWEKLGYCPYGRRCCFKHGDDNDIAVYVKA--GTYCNVSSTSKQSDEKRSNG---RGSAKKKNLNVKVKALQR 282 baker's yeast
1731429  404 P 404 fission yeast
19075093     -     Encephalitozoon cuniculi
6320355  323 M 323 baker's yeast
1706181  283 M 283 baker's yeast
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