5HI9,6U84,6BO4,6OO3,6BWJ,6BWM,6BO5


Conserved Protein Domain Family
TRPV2

?
cd22197: TRPV2 
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2
TRPV2 is closely related to TRPV1, sharing high sequence identity (>50%), but TRPV2 shows a higher temperature threshold and sensitivity for activation than TRPV1. TRPV2 can be stimulated by ligands or lipids, and is involved in osmosensation and mechanosensation. TRPV2 is expressed in both neuronal and non-neuronal tissues, and it has been implicated in diverse physiological and pathophysiological processes, including cardiac-structure maintenance, innate immunity, and cancer. TRPV2 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.
Statistics
?
PSSM-Id: 411981
Aligned: 9 rows
Threshold Bit Score: 1093.74
Created: 6-Jul-2020
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
 
Conserved site includes 68 residues -Click on image for an interactive view with Cn3D
Feature 1:tetramer interface [polypeptide binding site]
Evidence:
  • Comment:All members of the TRPV channel subfamily have a basic architecture of homo- or hetero-tetrameric arrangements around a central pore. Different subunits within the TRP family are also able to form heteromeric channels, with the heteromeric channels exhibiting distinct functional properties as compared to the homomeric channels.
  • Structure:5H19: Rat TRPV2 forms a homotetramer; contacts at 4A
    View structure with Cn3D
  • Structure:6OO3: Oryctolagus cuniculus TRPV2 forms a homotetramer; contacts at 4A
    View structure with Cn3D

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                             ##                       
5HI9_A      71 EPDRFDRDRLFSVVsrgVPEELTGLLEYlrwNSKYLTDSAYTEGSTGKTCLMKAVLNLQDgvNACIMPLLQIDKdsgnp- 149 Rattus norvegicus
6U84_A      71 EPDRFDRDRLFSVVsrgVPEELTGLLEYlrwNSKYLTDSAYTEGSTGKTCLMKAVLNLQDgvNACIMPLLQIDKdsgnp- 149 Rattus norvegicus
6BO4_A      31 TPDRFDRDRLFSVVsrgVPEELTGLLEYlrwNSKYLTDSAYTEGSTGKTCLMKAVLNLQDgvNACIMPLLQIDKdsgnp- 109 Rattus norvegicus
6OO3_A      69 DLNRFDRDRLFNVVargNPEDLAGLLEYlrrTSKYLTDSEYTEGSTGKTCLMKAVLNLQDgvNACIQPLLEIDRdsgnp- 147 Oryctolagus cunic...
6BWJ_A      68 DLNRFDRDRLFNVVargNPEDLAGLLEYlrrTSKYLTDSEYTEGSTGKTCLMKAVLNLQDgvNACIQPLLEIDRdsgnp- 146 Oryctolagus cunic...
6BWM_A      68 DLNRFDRDRLFNVVargNPEDLAGLLEYlrrTSKYLTDSEYTEGSTGKTCLMKAVLNLQDgvNACIQPLLEIDRdsgnp- 146 rabbit
6BO5_A      31 TPDRFDRDRLFSVVsrgVPEELTGLLEYlrwNSKYLTDSAYTEGSTGKTCLMKAVLNLQDgvNACIMPLLQIDKdsgnp- 109 Norway rat
KAE8622032  80 PSQVYDRNRIFTAVtngDTQDLAGLQNYlhkTMKRLTNTEFKDPDTGKTCLLKAMWNLKDg-MNDTIPILLEAAekggyl 158 tropical clawed frog
TFK12997    85 DPNRFDRDRLFDAVssgNPEELDGLLDYlsrTSKFLSDSRYTDAETGKTCLMKALLNLKDgtNATIPLLLEIDQktenp- 163 big-headed turtle
Feature 1                             ##                                ##                     
5HI9_A     150 kplvnAQCTDEFYQGHSALHIAIEKRslQCVKLLVENgadvhlRACGRFFqkh-qgTCFYFGELPLSLAACTKqWDVVTY 228 Rattus norvegicus
6U84_A     150 kllvnAQCTDEFYQGHSALHIAIEKRslQCVKLLVENgadvhlRACGRFFqkh-qgTCFYFGELPLSLAACTKqWDVVTY 228 Rattus norvegicus
6BO4_A     110 kplvnAQCTDEFYQGHSALHIAIEKRslQCVKLLVENgadvhlRACGRFFqkh-qgTCFYFGELPLSLAACTKqWDVVTY 188 Rattus norvegicus
6OO3_A     148 qplvnAQCTDEYYRGHSALHIAIEKRslQCVKLLVENganvhaKACGHFFqkn-qdTCFYFGELPLSLAACTKqWDVVNY 226 Oryctolagus cunic...
6BWJ_A     147 qplvnAQCTDEYYRGHSALHIAIEKRslQCVKLLVENganvhaKACGHFFqkn-qdTCFYFGELPLSLAACTKqWDVVNY 225 Oryctolagus cunic...
6BWM_A     147 qplvnAQCTDEYYRGHSALHIAIEKRslQCVKLLVENganvhaKACGHFFqkn-qdTCFYFGELPLSLAACTKqWDVVNY 225 rabbit
6BO5_A     110 kplvnAQCTDEFYQGHSALHIAIEKRslQCVKLLVENgadvhlRACGRFFqkh-qgTCFYFGELPLSLAACTKqWDVVTY 188 Norway rat
KAE8622032 159 kelvdAAYTNDYYRGQTALHIAIEKRnmHLVQLLIKSgadlraMAEGDFFqkkkkgISFYFGELPLSLAACTNqLNIVNY 238 tropical clawed frog
TFK12997   164 rplvnAACTNSYYAGQTALHIAIEKRhlDLVKLLVENgadvhaRAHGEFFrkkkegVCFYFGELPLSLAACTNqFDVIKY 243 big-headed turtle
Feature 1                                                                                      
5HI9_A     229 LLENPhqpasleatdslGNTVLHALVMIADnspeNSALVIHMYDGLLQMGarlcptvqlEEISNHQGLTPLKLAAKEgKI 308 Rattus norvegicus
6U84_A     229 LLENPhqpasleatdslGNTVLHALVMIADnspeNSALVIHMYDGLLQMGarlcptvqlEEISNHQGLTPLKLAAKEgKI 308 Rattus norvegicus
6BO4_A     189 LLENPhqpasleatdslGNTVLHALVMIADnspeNSALVIHMYDGLLQMGarlcptvqlEEISNHQGLTPLKLAAKEgKI 268 Rattus norvegicus
6OO3_A     227 LLENPhqpaslqaqdslGNTVLHALVMIADdsaeNSALVVRMYDGLLQAGarlcpnvqlEGIPNLEGLTPLKLAAKEgKI 306 Oryctolagus cunic...
6BWJ_A     226 LLENPhqpaslqaqdslGNTVLHALVMIADdsaeNSALVVRMYDGLLQAGarlcpnvqlEGIPNLEGLTPLKLAAKEgKI 305 Oryctolagus cunic...
6BWM_A     226 LLENPhqpaslqaqdslGNTVLHALVMIADdsaeNSALVVRMYDGLLQAGarlcpnvqlEGIPNLEGLTPLKLAAKEgKI 305 rabbit
6BO5_A     189 LLENPhqpasleatdslGNTVLHALVMIADnspeNSALVIHMYDGLLQMGarlcptvqlEEISNHQGLTPLKLAAKEgKI 268 Norway rat
KAE8622032 239 LLDKKadlaa---rdshGNTVLHALVFVSDnteeNTEIVTKMYDEILKKSvktdptlkiEEITNWEGLTPLKLAAKTgKI 315 tropical clawed frog
TFK12997   244 LLDNPyqkarlqeqdslGNTVLHALVVIADdtkqNTELVCKMYDEILKAGtkinpaeklEEIVNRAGLTPLKLAAKKgKV 323 big-headed turtle
Feature 1                              #######                                                 
5HI9_A     309 EIFRHILQRefsgp-yqplsRKFTEWCYGPVRVSLYDLSsVDSWEKNSVLEIIAFHCkspnrhrmvvlEPLNKLLQEKWD 387 Rattus norvegicus
6U84_A     309 EIFRHILQRefsgp-yqplsRKFTEWCYGPVRVSLYDLSsVDSWEKNSVLEIIAFHCkspnrhrmvvlEPLNKLLQEKWD 387 Rattus norvegicus
6BO4_A     269 EIFRHILQRefsgp-yqplsRKFTEWCYGPVRVSLYDLSsVDSWEKNSVLEIIAFHCkspnrhrmvvlEPLNKLLQEKWD 347 Rattus norvegicus
6OO3_A     307 EIFKHILQRefsap-cqslsRKFTEWCYGPVRVSLYDLAsVDSWEENSVLEIIAFHSrsphrhrmvvlEPLNKLLQAKWD 385 Oryctolagus cunic...
6BWJ_A     306 EIFKHILQRefsap-cqslsRKFTEWCYGPVRVSLYDLAsVDSWEENSVLEIIAFHSrsphrhrmvvlEPLNKLLQAKWD 384 Oryctolagus cunic...
6BWM_A     306 EIFKHILQRefsap-cqslsRKFTEWCYGPVRVSLYDLAsVDSWEENSVLEIIAFHSrsphrhrmvvlEPLNKLLQAKWD 384 rabbit
6BO5_A     269 EIFRHILQRefsgp-yqplsRKFTEWCYGPVRVSLYDLSsVDSWEKNSVLEIIAFHCkspnrhrmvvlEPLNKLLQEKWD 347 Norway rat
KAE8622032 316 ELFKHILRRevtepeykhlsRKFTEWTYGPVHTSLYDLSsVDTHEADSVLETIVFKSnasnrhnmvvlEPINTLLEEKWE 395 tropical clawed frog
TFK12997   324 EIFRHILQReikdpeyrhlsRKFTEWIYGPVHVSLYDLSsVDSYEKNSVLEILAESSdtpnrykmvvlEPLNKLLQHKWN 403 big-headed turtle
Feature 1      #                    #  ## #                                                    
5HI9_A     388 Rl-VSRFFFNFACYLVYMFIFTVVAYHQpsldqpaipsskatFGESMLLLGHILILLGGIYLLLGQLWYFWRRRLFIWIS 466 Rattus norvegicus
6U84_A     388 Rl-VSRFFFNFACYLVYMFIFTVVAYHQpsldqpaipsskatFGESMLLLGHILILLGGIYLLLGQLWYFWRRRLFIWIS 466 Rattus norvegicus
6BO4_A     348 Rl-VSRFFFNFACYLVYMFIFTVVAYHQpsldqpaipsskatFGESMLLLGHILILLGGIYLLLGQLWYFWRRRLFIWIS 426 Rattus norvegicus
6OO3_A     386 Rl-IPRFCFNFLCYLVYMLIFTAVAYHQpalekqgfpplkatAGNSMLLLGHILILLGGVYLLLGQLWYFWRRRLFIWIS 464 Oryctolagus cunic...
6BWJ_A     385 Rl-IPRFCFNFLCYLVYMLIFTAVAYHQpalekqgfpplkatAGNSMLLLGHILILLGGVYLLLGQLWYFWRRRLFIWIS 463 Oryctolagus cunic...
6BWM_A     385 Rl-IPRFCFNFLCYLVYMLIFTAVAYHQpalekqgfpplkatAGNSMLLLGHILILLGGVYLLLGQLWYFWRRRLFIWIS 463 rabbit
6BO5_A     348 Rl-VSRFFFNFACYLVYMFIFTVVAYHQpsldqpaipsskatFGESMLLLGHILILLGGIYLLLGQLWYFWRRRLFIWIS 426 Norway rat
KAE8622032 396 NfaGKIFYIKFLLYILYMIIFTVTAYHRplqgqpp-fplegtAKGNLRVIGEIIMMFGAIYILICQIIYFWKRRPSLQIL 474 tropical clawed frog
TFK12997   404 SfvARRFYLSFFCYFIFMAIFTVLAYHRplqlqsp-fraeftAIGFLQLTGQIIVFLGGFYLIIAQILYFLRRWRNLKNV 482 big-headed turtle
Feature 1                                         ## ##  ## ##           #  ##  #      #  ##  #
5HI9_A     467 FMDSYFEILFLLQALLTVLSQVLRFMeteWYLPLLVLSLVLGWLNLLYYTRgfqHTGIYSVMIQKVILrdLLRFLLVYLV 546 Rattus norvegicus
6U84_A     467 FMDSYFEILFLLQALLTVLSQVLRFMeteWYLPLLVLSLVLGWLNLLYYTRgfqHTGIYSVMIQKVILrdLLRFLLVYLV 546 Rattus norvegicus
6BO4_A     427 FMDSYFEILFLLQALLTVLSQVLRFMeteWYLPLLVLSLVLGWLNLLYYTRgfqHTGIYSVMIQKVILrdLLRFLLVYLV 506 Rattus norvegicus
6OO3_A     465 FMDSYSEILFLLQALLTVLSQVLCFLaieWYLPLLVSSLAMGWTNLLYYTRgfqHTGIYSVMIEKVILrdLLRFLLVYLV 544 Oryctolagus cunic...
6BWJ_A     464 FMDSYSEILFLLQALLTVLSQVLCFLaieWYLPLLVSSLVMGWTNLLYYTRgfqHTGIYSVMIEKVILrdLLRFLLVYLV 543 Oryctolagus cunic...
6BWM_A     464 FMDSYFEILFLLQALLTVLSQVLCFLaieWYLPLLVSSLVLGWLNLLYYTRgfqHTGIYSVMIQKVILrdLLRFLLVYLV 543 rabbit
6BO5_A     427 FMDSYFEILFLLQALLTVLSQVLRFMeteWYLPLLVLSLVLGWLNLLYYTRgfqHTGIYSVMIQKVILrdLLRFLLVYLV 506 Norway rat
KAE8622032 475 MMDGYFEILFFLQALILLCSGATYLAgseVYVALMVFSLVIGWVDMLYYTRgfqQTGIYSVMIQKTILrdMLRFLFVYLV 554 tropical clawed frog
TFK12997   483 FSDGCIEVFLLLQAFSLLLSAVLYIVgseDYVPMMVFSLLLGWVNMLYYTRgfqWTGIYCVMIQKTILrdLLRFLVVYVI 562 big-headed turtle
Feature 1        ### ## ### ####                                  ## ##                  ###  #
5HI9_A     547 FLFGFAVALVSLSREARspkapednnstvteqptvgqeeepaPYRSILDASLELFKFTigmgelafqeqlrfrgVVLLLL 626 Rattus norvegicus
6U84_A     547 FLFGFAVALVSLSREARspkapednnstvteqptvgqeeepaPYRSILDASLELFKFTigmgelafqeqlrfrgVVLLLL 626 Rattus norvegicus
6BO4_A     507 FLFGFAVALVSLSREARspkapednnstvteqptvgqeeepaPYRSILDASLELFKFTigmgelafqeqlrfrgVVLLLL 586 Rattus norvegicus
6OO3_A     545 FLFGFAVALVSLSREAQnsrtpagpnatevgqpgagqedeapPYRSILDASLELFKFTigmgelafqeqlrfrgVVLLLL 624 Oryctolagus cunic...
6BWJ_A     544 FLFGFAVALVSLSREAQnsrtpagpnatevgqpgagqedeapPYRSILDASLELFKFTigmgelafqeqlrfrgVVLLLL 623 Oryctolagus cunic...
6BWM_A     544 FLFGFAVALVSLSREAQnsrtpagpnatevgqpgagqedeapPYRSILDASLELFKFTigmgelafqeqlrfrgVVLLLL 623 rabbit
6BO5_A     507 FLFGFAVALVSLSREARspkapednnstvteqptvgqeeepaPYRSILDASLELFKFTigmgelafqeqlrfrgVVLLLL 586 Norway rat
KAE8622032 555 FLFGFAAALVTLNGEAPqeaangt-----------eqsesgsSYGGLYITSLELFKFTigmgdlefnenlkfkhFFMFLL 623 tropical clawed frog
TFK12997   563 FLFGFAAALVTLAGDAPpasqnksvt-------pedgdqghvVYSGLLSTSLQLFKFTigmgdlefqehvkfkyFVMLLL 635 big-headed turtle
Feature 1      #  #     # ##### ##                                                            #
5HI9_A     627 LAYVLLTYVLLLNMLIALMSETVNHVADNsWSIWKLQKAISVLEMENGYWWCRrkkhregrllkvgtrgdgtpDERWCFR 706 Rattus norvegicus
6U84_A     627 LAYVLLTYVLLLNMLIALMSETVNHVADNsWSIWKLQKAISVLEMENGYWWCRrkkhregrllkvgtrgdgtpDERWCFR 706 Rattus norvegicus
6BO4_A     587 LAYVLLTYVLLLNMLIALMSETVNHVADNsWSIWKLQKAISVLEMENGYWWCRrkkhregrllkvgtrgdgtpDERWCFR 666 Rattus norvegicus
6OO3_A     625 LAYVLLTYVLLLNMLIALMSETVNSVATDsWSIWKLQKAISVLEMENGYWWCRrkkqragvmltvgtrpdgspDERWCFR 704 Oryctolagus cunic...
6BWJ_A     624 LAYVLLTYVLLLNMLIALMSETVNSVATDsWSIWKLQKAISVLEMENGYWWCRrkkqragvmltvgtrpdgspDERWCFR 703 Oryctolagus cunic...
6BWM_A     624 LAYVLLTYVLLLNMLIALMSETVNSVATDsWSIWKLQKAISVLEMENGYWWCRrkkqragvmltvgtrpdgspDERWCFR 703 rabbit
6BO5_A     587 LAYVLLTYVLLLNMLIALMSETVNHVADNsWSIWKLQKAISVLEMENGYWWCRrkkhregrllkvgtrgdgtpDERWCFR 666 Norway rat
KAE8622032 624 ILYVILTYILLLNMLIALMSETVSKISSEsKSIWKLQRAATILDIERFIPRFIrkklkigqwltvgkspdgnpDKRWCFR 703 tropical clawed frog
TFK12997   636 LLFVILTYILLLNMLIALMSETVTNVSGYsKSVWKLQRAIAILEIEKSWLWCPrrrqrsgcf--lsvslddkkDERWCFR 713 big-headed turtle
Feature 1       ###
5HI9_A     707 VEEV 710 Rattus norvegicus
6U84_A     707 VEEV 710 Rattus norvegicus
6BO4_A     667 VEEV 670 Rattus norvegicus
6OO3_A     705 VGEM 708 Oryctolagus cuniculus
6BWJ_A     704 VGEM 707 Oryctolagus cuniculus
6BWM_A     704 VGEM 707 rabbit
6BO5_A     667 VEEV 670 Norway rat
KAE8622032 704 VEEM 707 tropical clawed frog
TFK12997   714 VEEI 717 big-headed turtle

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap