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MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term
MMS1 is a protein that protects against replication-dependent DNA damage in Saccharomyces cerevisiae...
View in Cn3D
SF3b1: Splicing factor 3B subunit 1
This family consists of several eukaryotic splicing factor 3B subunit 1 proteins, which associate wi...
SF3b10: Splicing factor 3B subunit 10 (SF3b10)
This family consists of several eukaryotic splicing factor 3B subunit 10 (SF3b10) proteins. SF3b10 i...
DUF382: Domain of unknown function (DUF382)
This domain is specific to the human splicing factor 3b subunit 2 and it's orthologues. Splicing fac...
PHF5: PHF5-like protein
This family of proteins the superfamily of PHD-finger proteins. At least one example, from mouse, ma...
SAP: SAP domain
The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse...
Surp: Surp module
This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has be...
SrmB: Superfamily II DNA and RNA helicase [Replication, recombination and repair]
SF3a60_Prp9_C: SF3a60/Prp9 C-terminal
This domain corresponds to the C-terminal region of SF3a60 subunit (Prp9 in yeast counterpart) from ...
View in Cn3D Specific ProteinProteinSuperfamilySuperfamily MembersPubMed
CPSF_A: CPSF A subunit region
This family includes a region that lies towards the C-terminus of the cleavage and polyadenylation s...
KH-I_DDX46: type I K homology (KH) RNA-binding domain found in DEAD box protein 46 (DDX46) and similar proteins
DDX46, also called PRP5 homolog, is an ATP-dependent RNA helicase that plays an essential role in sp...
RRM1_U2B: RNA recognition motif 1 in U2 small nuclear ribonucleoprotein B" (U2B") and similar proteins
This subgroup corresponds to the RRM1 of U2B" (also termed U2 snRNP B") a unique protein that compri...
RRM2_SF3B4: RNA recognition motif 2 (RRM2) found in splicing factor 3B subunit 4 (SF3B4) and similar proteins
This subfamily corresponds to the RRM2 of SF3B4, also termed pre-mRNA-splicing factor SF3b 49 kDa (S...
RRM1_SF3B4: RNA recognition motif 1 (RRM1) found in splicing factor 3B subunit 4 (SF3B4) and similar proteins
This subfamily corresponds to the RRM1 of SF3B4, also termed pre-mRNA-splicing factor SF3b 49 kDa (S...
RRM2_TatSF1_like: RNA recognition motif 2 (RRM2) found in HIV Tat-specific factor 1 (Tat-SF1) and similar proteins
This subfamily corresponds to the RRM2 of Tat-SF1 and CUS2. Tat-SF1 is the cofactor for stimulation ...
RRM1_TatSF1_like: RNA recognition motif 1 (RRM1) found in HIV Tat-specific factor 1 (Tat-SF1) and similar proteins
This subfamily corresponds to the RRM1 of Tat-SF1 and CUS2. Tat-SF1 is the cofactor for stimulation ...
RRM_SF3B14: RNA recognition motif (RRM) found in pre-mRNA branch site protein p14 (SF3B14) and similar proteins
This subfamily corresponds to the RRM of SF3B14 (also termed p14), a 14 kDa protein subunit of SF3B ...
LRR_9: Leucine-rich repeat
View in Cn3D Specific ProteinProteinSuperfamilySuperfamily Members
PRP21_like_P: Pre-mRNA splicing factor PRP21 like protein
This domain family is found in eukaryotes, and is typically between 212 and 238 amino acids in lengt...
DEADc_DDX46: DEAD-box helicase domain of DEAD box protein 46
DDX46 (also called Prp5-like DEAD-box protein) is a component of the 17S U2 snRNP complex. It plays ...
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